common-workflow-language | CWL standards . | BPM library

by common-workflow-language Python Version: v1.0.2 License: Apache-2.0

X-Ray Key Features Code Snippets(3)Community Discussions(1)Vulnerabilities Install Support

kandi X-RAY | common-workflow-language Summary

common-workflow-language is a Python library typically used in Institutions, Learning, Education, Automation, BPM, Docker applications. common-workflow-language has no bugs, it has no vulnerabilities, it has a Permissive License and it has medium support. However common-workflow-language build file is not available. You can install using 'pip install common-workflow-language' or download it from GitHub, PyPI.

GitHub repository for www.commonwl.org: CWL v1.0.x: (this repository). [Support] #Support) [GitHub stars] The Common Workflow Language (CWL) is a specification for describing analysis workflows and tools in a way that makes them portable and scalable across a\ variety of software and hardware environments, from workstations to cluster, cloud, and high performance computing (HPC) environments. CWL is designed to meet the needs of data-intensive science, such as Bioinformatics, Medical Imaging, Astronomy, Physics, and Chemistry. CWL is developed by a multi-vendor working group consisting of organizations and individuals aiming to enable scientists to share data analysis workflows. [The CWL project is maintained on Github] and we follow the [Open-Stand.org principles for collaborative open standards development] Legally, CWL is a member project of [Software Freedom Conservancy] and is formally managed by the elected [CWL leadership team] #Leadership_Team), however every-day project decisions are made by the [CWL community] #Support) which is open for participation by anyone. CWL builds on technologies such as [JSON-LD] for data modeling and [Docker] for portable runtime environments.

Support

Quality

Security

License

Reuse

Support

common-workflow-language has a medium active ecosystem.

It has 1252 star(s) with 177 fork(s). There are 115 watchers for this library.

It had no major release in the last 12 months.

There are 226 open issues and 329 have been closed. On average issues are closed in 526 days. There are 22 open pull requests and 0 closed requests.

It has a neutral sentiment in the developer community.

The latest version of common-workflow-language is v1.0.2

Quality

common-workflow-language has 0 bugs and 0 code smells.

Security

common-workflow-language has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

common-workflow-language code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

common-workflow-language is licensed under the Apache-2.0 License. This license is Permissive.

Permissive licenses have the least restrictions, and you can use them in most projects.

Reuse

common-workflow-language releases are available to install and integrate.

Deployable package is available in PyPI.

common-workflow-language has no build file. You will be need to create the build yourself to build the component from source.

Top functions reviewed by kandi - BETA

kandi has reviewed common-workflow-language and discovered the below as its top functions. This is intended to give you an instant insight into common-workflow-language implemented functionality, and help decide if they suit your requirements.

Load and validate a document
Add resource properties
Add schemas
Resolve references
Merge two properties
Convert l to list
Merge context with new context
Expand a URL
Generate avrold documentation
Return HTML table of contents

Get all kandi verified functions for this library.

common-workflow-language Key Features

No Key Features are available at this moment for common-workflow-language.

common-workflow-language Examples and Code Snippets

CmdParser,Usage

C++

Lines of Code : 35

License : Non-SPDX (NOASSERTION)

Copy

ADD_SUBDIRECTORY(CmdParser) # that's all you would need to do to build the CmdParser library

TARGET_LINK_LIBRARIES( 
  ${EXECUTABLE_YOU_WANT_TO_INFUSE_WITH_FUNCTIONALITY}
  CmdParser
)

#include "CmdParser/include/cbicaCmdParser.h" // to shorten pat

IPython2CWL

Python

Lines of Code : 10

License : Permissive (Apache-2.0)

Copy

from ipython2cwl.iotypes import CWLFilePathInput, CWLFilePathOutput
import csv
input_filename: 'CWLFilePathInput' = 'data.csv'
with open(input_filename) as f:
    csv_reader = csv.reader(f)
    data = [line for line in csv_reader]
number_of_lines = l

IPython2CWL

Python

Lines of Code : 10

License : Permissive (Apache-2.0)

Copy

from ipython2cwl.iotypes import CWLFilePathInput, CWLFilePathOutput
import csv
input_filename: 'CWLFilePathInput' = 'data.csv'
with open(input_filename) as f:
    csv_reader = csv.reader(f)
    data = [line for line in csv_reader]
number_of_lines = l

Community Discussions

Trending Discussions on common-workflow-language

SPARQLWrapper can't make CONSTRUCT query return other than XML

QUESTION

SPARQLWrapper can't make CONSTRUCT query return other than XML

Asked 2020-Nov-05 at 17:35

I'm using SPARQLWrapper to query a local SPARQL endpoint (using apache-jena-fuseki), and some of my queries are CONSTRUCT queries.

The query will give me valid results on web-based SPARQL interface, e.g. yasgui. When using SPARQLWrapper, the default query method will give me this error:

...

ANSWER

Answered 2020-Nov-05 at 17:35

SPARQLWrapper defaults to adding

&format=turtle&output=turtle&results=turtle

to the request.

SPARQLWrapper has a method setOnlyConneg that turns off the adding of the additional query string parts.

The WARN SPARQL Query: Unrecognize request parameter (ignored): results happens because Fuseki does understand results and logs a warning about it. It is just a warning.
format is a mechanism to override the proper HTTP content negotiation mechanism because in some situations it is hard to set the HTTP headers. This does not apply to SPARQLWrapper which does correctly set Accept:.
format=turtle isn't in the list of names for a CONSTRUCT query. ttl is. (`turtle can be added to future version of Fuseki for completeness).

The best way is not to have the non-standard query string parameters with setOnlyConneg. SPARQLWrapper correctly sets the "Accept:" header in the request and Fuseki has content negotiation and will work with that header.

Source https://stackoverflow.com/questions/64646788

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install common-workflow-language

You can install using 'pip install common-workflow-language' or download it from GitHub, PyPI.
You can use common-workflow-language like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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