covariants | time updates and information about key SARS | Dataset library

by hodcroftlab Python Version: version-0.1.0 License: AGPL-3.0

X-Ray Key Features Code Snippets Community Discussions(6)Vulnerabilities Install Support

kandi X-RAY | covariants Summary

covariants is a Python library typically used in Artificial Intelligence, Dataset, Docker applications. covariants has no bugs, it has no vulnerabilities, it has build file available, it has a Strong Copyleft License and it has low support. You can download it from GitHub.

SARS-CoV-2 Mutations and Variants of Interest by Emma B. Hodcroft Institute of Social and Preventive Medicine University of Bern, Bern, Switzerland & SIB Swiss Insitute of Bioinformatics, Switzerland.

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Support

covariants has a low active ecosystem.

It has 305 star(s) with 115 fork(s). There are 21 watchers for this library.

It had no major release in the last 6 months.

There are 59 open issues and 76 have been closed. On average issues are closed in 34 days. There are 14 open pull requests and 0 closed requests.

It has a neutral sentiment in the developer community.

The latest version of covariants is version-0.1.0

Quality

covariants has no bugs reported.

Security

covariants has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

covariants is licensed under the AGPL-3.0 License. This license is Strong Copyleft.

Strong Copyleft licenses enforce sharing, and you can use them when creating open source projects.

Reuse

covariants releases are not available. You will need to build from source code and install.

Build file is available. You can build the component from source.

Installation instructions are not available. Examples and code snippets are available.

Top functions reviewed by kandi - BETA

kandi has reviewed covariants and discovered the below as its top functions. This is intended to give you an instant insight into covariants implemented functionality, and help decide if they suit your requirements.

Convert per_cluster_data to distutils
Interpolate per cluster data
Compute the difference between two blocks
Calculate the per - cluster distribution
Plot countries data
Plot count of non - zero counts
Trim the last data point from the last cluster
Convert region data into a dictionary
Convert per country data to cluster names
Wrap country_data_as
Convert a mutation expression to a pandas dataframe
Parse a mutation string
Plot the number of non - zero counts in each cluster
Return the properties for a cluster
Prints all date alerts
Print all alert alerts
Convert to week ordinal date
Build the LAPIS URL
Calculate the logistic function
Compares two dates
Creates the ura_urls for all variants in the cluster
Update the name table
Get the summary of the cluster metadata
Get the ordered clusters to plot
Check for acknowledgements
Download OWID data

Get all kandi verified functions for this library.

covariants Key Features

No Key Features are available at this moment for covariants.

covariants Examples and Code Snippets

No Code Snippets are available at this moment for covariants.

Community Discussions

Trending Discussions on covariants

Why using a different return type in virtual function declaration throws an error instead of resulting in a redefinition?

Reading multiple tables from one tsv file to an R dataframe

Circumventing variance checks with extension methods

C++ Derived Class Override Return Type

How can I add an instance of a generic type to a list in Kotlin

scala variant type causes error type mismatch error

QUESTION

Why using a different return type in virtual function declaration throws an error instead of resulting in a redefinition?

Asked 2021-Jun-07 at 03:43

Base class:

...

ANSWER

Answered 2021-Jun-07 at 03:43

When the compiler encounters the matching signature (arguments, constness), it automatically makes the void f() const declaration virtual. So the definition of Derived is interpreted as:

Source https://stackoverflow.com/questions/67862539

QUESTION

Reading multiple tables from one tsv file to an R dataframe

Asked 2021-Feb-04 at 12:47

I want to read the data from github in R. Here is my code.

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ANSWER

Answered 2021-Feb-04 at 11:21

Read the data with skip = 4

Source https://stackoverflow.com/questions/66044303

QUESTION

Circumventing variance checks with extension methods

Asked 2019-Apr-01 at 19:54

This doesn't compile:

...

ANSWER

Answered 2019-Apr-01 at 14:27

I don't think it's cheating any more than the version after desugaring is:

Source https://stackoverflow.com/questions/55455707

QUESTION

C++ Derived Class Override Return Type

Asked 2018-Dec-17 at 07:06

I think my example below will explain what I am trying to do. I know that I cannot override the return type of the eval() function unless they are covariants, so obviously I am doing something wrong. My question: how do I have a polymorphic base class and derived classes which can evaluate themselves in different ways?

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ANSWER

Answered 2018-Dec-13 at 15:29

You cannot.

The static type of an expression cannot depend on the dynamic type of an object. Take for instance:

Source https://stackoverflow.com/questions/53765091

QUESTION

How can I add an instance of a generic type to a list in Kotlin

Asked 2018-Feb-17 at 09:18

I have been searching for a while to get a proper solution for this.

What I would like to do is add a specific number of empty objects to a list in the init method.

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ANSWER

Answered 2018-Feb-17 at 08:56

The problem I see is that there isn't any empty object for any type T.

You could pass this "default" object as a parameter:

Source https://stackoverflow.com/questions/48839564

QUESTION

scala variant type causes error type mismatch error

Asked 2018-Jan-30 at 14:56

B is a super class of A , then as per scala variants and covariants . variant type can occur at parameter and covariant type can occur at function return type

My scala class make method is taking B type in paramters and returning subtype A as function type but as per function "make" it is correct but if i have companion class like case class for same class which is generic in A is giving error. I spent enough time to correct this error but not able to do so.

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ANSWER

Answered 2018-Jan-30 at 14:39

I think the minimal changes to make this code compile is to change Cons to

Source https://stackoverflow.com/questions/48523294

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install covariants

You can download it from GitHub.
You can use covariants like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

Support

The code used to generate data seen on CoVariants.org can be found in this repository, mostly in the scripts/ folder, and the code for the web application is in web/. See Contributors Guide for more details.

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