hyperopt | Distributed Asynchronous Hyperparameter Optimization | Architecture library
kandi X-RAY | hyperopt Summary
kandi X-RAY | hyperopt Summary
Hyperopt is a Python library for serial and parallel optimization over awkward search spaces, which may include real-valued, discrete, and conditional dimensions.
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Top functions reviewed by kandi - BETA
- Execute the minimum function
- Minimize function
- Validate the loss threshold
- Validate the timeout argument
- Main worker
- Wait for jobs to finish
- Main worker function
- Refresh the job
- Return a list of Attachments for the given trial
- Get list of attachments
- Compute a categorical distribution
- Gets the list of attachments for a trial
- Return a list of new trial ids for the given experiment
- Read page data
- Inject results into source trial docs
- Pretty print the object
- Define a partial function
- Store attachment to a given blob
- Compute the logarithm of the gaussian distribution
- Plot 1D attachment
- Main function
- Generate adaptive parzen - normal variates
- Process a docstring
- Return a graph representation of the hyperparameters
- Min minimum function
- Map indices
hyperopt Key Features
hyperopt Examples and Code Snippets
usage: freqtrade hyperopt [-h] [-v] [--logfile FILE] [-V] [-c PATH] [-d PATH]
[--userdir PATH] [-s NAME] [--strategy-path PATH]
[--recursive-strategy-search] [--freqaimodel NAME]
// ...
"dataformat_ohlcv": "hdf5",
"dataformat_trades": "hdf5",
// ...
Found 6 pair / timeframe combinations.
+----------+-------------+--------+---------------------+---------------------+
| Pair | Timeframe | Type |
usage: freqtrade download-data [-h] [-v] [--logfile FILE] [-V] [-c PATH]
[-d PATH] [--userdir PATH]
[-p PAIRS [PAIRS ...]] [--pairs-file FILE]
[--days INT] [
Community Discussions
Trending Discussions on hyperopt
QUESTION
I'm trying to install conda environment using the command:
...ANSWER
Answered 2021-Dec-22 at 18:02This solves fine (), but is indeed a complex solve mainly due to:
- underspecification
- lack of modularization
This particular environment specification ends up installing well over 300 packages. And there isn't a single one of those that are constrained by the specification. That is a huge SAT problem to solve and Conda will struggle with this. Mamba will help solve faster, but providing additional constraints can vastly reduce the solution space.
At minimum, specify a Python version (major.minor), such as python=3.9
. This is the single most effective constraint.
Beyond that, putting minimum requirements on central packages (those that are dependencies of others) can help, such as minimum NumPy.
Lack of ModularizationI assume the name "devenv" means this is a development environment. So, I get that one wants all these tools immediately at hand. However, Conda environment activation is so simple, and most IDE tooling these days (Spyder, VSCode, Jupyter) encourages separation of infrastructure and the execution kernel. Being more thoughtful about how environments (emphasis on the plural) are organized and work together, can go a long way in having a sustainable and painless data science workflow.
The environment at hand has multiple red flags in my book:
conda-build
should be in base and only in basesnakemake
should be in a dedicated environmentnotebook
(i.e., Jupyter) should be in a dedicated environment, co-installed withnb_conda_kernels
; all kernel environments need areipykernel
I'd probably also have the linting/formatting packages separated, but that's less an issue. The real killer though is snakemake
- it's just a massive piece of infrastructure and I'd strongly encourage keeping that separated.
QUESTION
I'm trying to optimize a custom model (no fancy ML whatsoever) that has 13 parameters, 12 of which I know to be normally distributed. I've gotten decent results using the hyperopt
library:
ANSWER
Answered 2021-Nov-11 at 22:46You can cheat optuna
by using uniform distribution and transforming it into normal distribution. To do that one of the method is inversed error function implemented in scipy
.
Function takes uniform distribution from in range <-1, 1> and converts it to standard normal distribution
QUESTION
data source: https://catalog.data.gov/dataset/nyc-transit-subway-entrance-and-exit-data
I tried looking for a similar problem but I can't find an answer and the error does not help much. I'm kinda frustrated at this point. Thanks for the help. I'm calculating the closest distance from a point.
...ANSWER
Answered 2021-Oct-11 at 14:21geopandas 0.10.1
- have noted that your data is on kaggle, so start by sourcing it
- there really is only one issue
shapely.geometry.MultiPoint()
constructor does not work with a filtered series. Pass it a numpy array instead and it works. - full code below, have randomly selected a point to serve as
gpdPoint
QUESTION
I'm trying to generate a frozen discrete Uniform Distribution (like stats.randint(low, high)
) but with steps higher than one, is there any way to do this with scipy ?
I think it could be something close to hyperopt's hp.uniformint
.
ANSWER
Answered 2021-Sep-12 at 09:31rv_discrete(values=(xk, pk))
constructs a distribution with support xk
and provabilities pk
.
See an example in the docs: https://docs.scipy.org/doc/scipy/reference/generated/scipy.stats.rv_discrete.html
QUESTION
I need to edit currently running py file and than re run it with new contant! Ok Mainest problem is that. I want to do that:
Runinng in bash:
freqtrade hyperopt --strategy GodStraNew ...
It will run GodStraNew.py file as therdparty app
I'm now inside GodStraNew.py
I will stop the code after seeing this variable:
dnaSize=10
Now will edit the GodStraNew.py file As which I want, for example, adding 9 lines to it.
than run again the hyperopt command with args, and without exiting!
ANSWER
Answered 2021-Aug-07 at 17:09I am afraid there is no way to edit a running file But you can make a JSON file or TXT file and store data from. Example:
QUESTION
I am running runtime 8.1 (includes Apache Spark 3.1.1, Scala 2.12) trying to get hyperopt working as defined by
https://docs.databricks.com/applications/machine-learning/automl-hyperparam-tuning/hyperopt- spark-mlflow-integration.html
...ANSWER
Answered 2021-May-03 at 16:01Hyperopt is only included into the DBR ML runtimes, not into the stock runtimes. You can check it by looking into release notes for each of runtimes: DBR 8.1 vs. DBR 8.1 ML.
And from the docs:
Databricks Runtime for Machine Learning incorporates MLflow and Hyperopt, two open source tools that automate the process of model selection and hyperparameter tuning.
QUESTION
I am trying to use Optuna for hyperparameter tuning of my model.
I am stuck in a place where I want to define a search space having lognormal/normal distribution. It is possible in hyperopt
using hp.lognormal
. Is it possible to define such a space using a combination of the existing suggest_
api of Optuna
?
ANSWER
Answered 2021-Jan-25 at 09:08You could perhaps make use of inverse transforms from suggest_float(..., 0, 1)
(i.e. U(0, 1)) since Optuna currently doesn't provide suggest_
variants for those two distributions directly. This example might be a starting point https://gist.github.com/hvy/4ef02ee2945fe50718c71953e1d6381d
Please find the code below
QUESTION
I am trying to run the optimization of a ML model using SparkTrials
from the hyperopt
library. I am running this on a single machine with 16 cores but when I run the following code which sets the number of cores to 8 I get a warning that seems to indicate that only one core is used.
SparkTrials accepts as an argument spark_session
which in theory is where I set the number of cores.
Can anyone help me?
Thanks!
...ANSWER
Answered 2020-Nov-02 at 14:12if you are in cluster: The core in Spark nomenclature is unrelated to the physical core in your CPU here with spark.executor.cores
you specified the maximum number of thread(=task) each executor(you have one here) can run is 8 if you want to increase the number of executors you have to use --num-executors
in command-line or spark.executor.instances
configuration property in your code.
I suggest try something like this configuration if you are in a yarn cluster
QUESTION
Every time I try to install HyperOpt-Sklearn library in Google Collab, I get the following error:
...ANSWER
Answered 2020-Oct-19 at 17:48Although not mentioned in their documentation, turns out the package is available at PyPi and it can be installed simply by pip
; the following is run in a Google Colab notebook:
QUESTION
I classify clients by many little xgboost models created from different parts of dataset. Since it is hard to support many models manually, I decided to automate hyperparameters tuning via Hyperopt and features selection via Boruta.
Would you advise me please, what should go first: hyperparameters tuning or features selection? On the other hand, it does not matter. After features selection, the number of features decreases from 2500 to 100 (actually, I have 50 true features and 5 categorical features turned to 2 400 via OneHotEncoding).
If some code is needed, please, let me know. Thank you very much.
...ANSWER
Answered 2020-Sep-21 at 14:52Feature selection (FS) can be considered as a preprocessing activity, wherein, the aim is to identify features having low bias and low variance [1].
Meanwhile, the primary aim of hyperparameter optimization (HPO) is to automate hyper-parameter tuning process and make it possible for users to apply Machine Learning (ML) models to practical problems effectively [2]. Some important reasons for applying HPO techniques to ML models are as follows [3]:
It reduces the human effort required, since many ML developers spend considerable time tuning the hyper-parameters, especially for large datasets or complex ML algorithms with a large number of hyper-parameters.
It improves the performance of ML models. Many ML hyper-parameters have different optimums to achieve best performance in different datasets or problems.
It makes the models and research more reproducible. Only when the same level of hyper-parameter tuning process is implemented can different ML algorithms be compared fairly; hence, using a same HPO method on different ML algorithms also helps to determine the most suitable ML model for a specific problem.
Given the above difference between the two, I think FS should be first applied followed by HPO for a given algorithm.
References
[1] Tsai, C.F., Eberle, W. and Chu, C.Y., 2013. Genetic algorithms in feature and instance selection. Knowledge-Based Systems, 39, pp.240-247.
[2] M. Kuhn, K. Johnson Applied Predictive Modeling Springer (2013) ISBN: 9781461468493.
[3] F. Hutter, L. Kotthoff, J. Vanschoren (Eds.), Automatic Machine Learning: Methods, Systems, Challenges, 9783030053185, Springer (2019)
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
No vulnerabilities reported
Install hyperopt
If you're a developer and wish to contribute, please follow these steps:.
Create an account on GitHub if you do not already have one.
Fork the project repository: click on the ‘Fork’ button near the top of the page. This creates a copy of the code under your account on the GitHub user account. For more details on how to fork a repository see this guide.
Clone your fork of the hyperopt repo from your GitHub account to your local disk: $ git clone https://github.com/<github username>/hyperopt.git $ cd hyperopt
Create environment with: $ python3 -m venv my_env or $ python -m venv my_env or with conda: $ conda create -n my_env python=3. Activate the environment: $ source my_env/bin/activate or with conda: $ conda activate my_env. Install dependencies for extras (you'll need these to run pytest): Linux/UNIX: $ pip install -e '.[MongoTrials, SparkTrials, ATPE, dev]'.
Create environment with: $ python3 -m venv my_env or $ python -m venv my_env or with conda: $ conda create -n my_env python=3
Activate the environment: $ source my_env/bin/activate or with conda: $ conda activate my_env
Install dependencies for extras (you'll need these to run pytest): Linux/UNIX: $ pip install -e '.[MongoTrials, SparkTrials, ATPE, dev]' or Windows: pip install -e .[MongoTrials] pip install -e .[SparkTrials] pip install -e .[ATPE] pip install -e .[dev]
Add the upstream remote. This saves a reference to the main hyperopt repository, which you can use to keep your repository synchronized with the latest changes: $ git remote add upstream https://github.com/hyperopt/hyperopt.git You should now have a working installation of hyperopt, and your git repository properly configured. The next steps now describe the process of modifying code and submitting a PR:
Synchronize your master branch with the upstream master branch: $ git checkout master $ git pull upstream master
Create a feature branch to hold your development changes: $ git checkout -b my_feature and start making changes. Always use a feature branch. It’s good practice to never work on the master branch!
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