6 best Ruby Genomics libraries in 2024
by marketing.admin@openweaver.com Updated: Feb 1, 2023
Guide Kit
Ruby programming language is the best language for building bioinformatics applications. Ruby programming language is flexible and dynamic nature makes it a great fit for bioinformatics and genomics projects. Ruby has been the go-to language for many bioinformaticians for decades. It's easy to use, highly expressive, and supports both object-oriented and functional programming styles. It's also a great choice for quick scripting tasks. While the last decade has seen the growth of high-performance computing in bioinformatics, the processing power available to most researchers is still limited. It is designed specifically for working with biological data, making it ideal for a wide variety of applications including machine learning, epidemiology, and systems biology. Popular Ruby Genomics open source libraries for developers include: sequenceserver - Intuitive local web frontend for the BLAST bioinformatics tool; dgidb - Rails frontend to The Genome Institute; nimbus - Ruby gem to implement Random Forest algorithms.
sequenceserverby wurmlab
Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)
sequenceserverby wurmlab
JavaScript 251 Version:2.0.0 License: Others (Non-SPDX)
dgidbby dgidb
Rails frontend to The Genome Institute's drug gene interaction database.
dgidbby dgidb
Ruby 83 Version:v2.22 License: Permissive (MIT)
nimbusby xuanxu
Nimbus is a Ruby gem to implement Random Forest algorithms in a genomic selection context
nimbusby xuanxu
Ruby 52 Version:v2.3.0 License: Permissive (MIT)
single_cell_portal_coreby broadinstitute
Rails/Docker application for the Broad Institute's single cell RNA-seq data portal
single_cell_portal_coreby broadinstitute
Ruby 56 Version:1.45.0 License: Permissive (BSD-3-Clause)