HAST | Resolved Assembly for Synthetic Long Reads Using

 by   BGI-Qingdao C++ Version: v1.02 License: GPL-3.0

kandi X-RAY | HAST Summary

kandi X-RAY | HAST Summary

HAST is a C++ library. HAST has no bugs, it has no vulnerabilities, it has a Strong Copyleft License and it has low support. You can download it from GitHub.

Partition stLFR reads based on trio-binning algorithm using parentally unique markers.
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            kandi-support Support

              HAST has a low active ecosystem.
              It has 14 star(s) with 2 fork(s). There are 1 watchers for this library.
              OutlinedDot
              It had no major release in the last 12 months.
              HAST has no issues reported. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of HAST is v1.02

            kandi-Quality Quality

              HAST has no bugs reported.

            kandi-Security Security

              HAST has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              HAST is licensed under the GPL-3.0 License. This license is Strong Copyleft.
              Strong Copyleft licenses enforce sharing, and you can use them when creating open source projects.

            kandi-Reuse Reuse

              HAST releases are available to install and integrate.
              Installation instructions are not available. Examples and code snippets are available.

            Top functions reviewed by kandi - BETA

            kandi's functional review helps you automatically verify the functionalities of the libraries and avoid rework.
            Currently covering the most popular Java, JavaScript and Python libraries. See a Sample of HAST
            Get all kandi verified functions for this library.

            HAST Key Features

            No Key Features are available at this moment for HAST.

            HAST Examples and Code Snippets

            HAST,USAGE
            C++dot img1Lines of Code : 34dot img1License : Strong Copyleft (GPL-3.0)
            copy iconCopy
            Usage   :
                    HAST.sh 
            
            Options :
                    -h/--help       print this usage and exit ;
            
                    --paternal      paternal ngs reads in fasta or fastq format ;
                                     * accept input file in gzip format, but the name should be ended  
            HAST,INSTALL
            C++dot img2Lines of Code : 3dot img2License : Strong Copyleft (GPL-3.0)
            copy iconCopy
            git clone https://github.com/BGI-Qingdao/HAST.git
            cd HAST
            make
              

            Community Discussions

            QUESTION

            Metro bundler: Error: EISDIR: illegal operation on a directory, read
            Asked 2021-Jun-10 at 07:43

            When I reload my bundle this exception is uncaught:

            ...

            ANSWER

            Answered 2021-Mar-23 at 23:00

            Apparently there's an issue with moving index.js to src/index.js. I moved it back to the project root and it's working fine now.

            Source https://stackoverflow.com/questions/66771543

            QUESTION

            How to transform an expression tree (AST) into DOM tree (XML)
            Asked 2021-Jun-09 at 08:54

            I need to allow a user to write expressions and build XML tree from the expression. My plan is to use math.js which parses and generates an expression tree, then convert that expression tree into DOM tree, and then convert DOM tree into XML using XMLSerializer. The part in bold is tricky one.

            For the expression:

            ...

            ANSWER

            Answered 2021-Jun-09 at 08:34

            You can extend the node object with a custom property like DOM and append children to the DOM of the parent node:

            Source https://stackoverflow.com/questions/67899717

            QUESTION

            Unable to resolve module @react-native-async-storage/async-storage
            Asked 2021-Jun-07 at 03:53

            Getting this error after adding aws-amplify to the project, Did complete setup for aws-amplify according to the docs, then pod install and react-native run-ios I have also tried changing the import statement as mentioned in the suggestion below error, still doesn't work, Thanks in advance.

            ...

            ANSWER

            Answered 2021-Jun-07 at 03:53

            Install Amplify libraries: here,

            Source https://stackoverflow.com/questions/67865267

            QUESTION

            Error: undefined Unable to resolve module
            Asked 2021-Jun-06 at 06:44

            I am trying to load glb file as:

            ...

            ANSWER

            Answered 2021-Jun-06 at 06:44

            Well, I performed some experiments loading assets, it looks like there is a problem with the bundler when using require inline, e.g., using the image component like this fires the same error

            Try requiring your asset in a previous line and then pass it to the .fromModule call.

            Source https://stackoverflow.com/questions/67756848

            QUESTION

            Error: Unable to resolve module ./Easing from node_modules\react-native-reanimated\src\Animated.js
            Asked 2021-May-27 at 15:19

            I have migrated from reanimated@1.9.0 and react-native-gesture-handler@1.9.0 to

            ...

            ANSWER

            Answered 2021-May-11 at 11:42

            I'm getting the same error on Android emulator with react-native-reanimated@2.1.0

            As a temporary fix I've fixed the library to react-native-reanimated@2.0.1 which seems fine.

            Source https://stackoverflow.com/questions/67256733

            QUESTION

            C++ Syntax error in header using class from another header
            Asked 2021-May-27 at 10:31

            EDIT: My IDE was giving me a bad error message and because I was going through a major refactor, there were so many error messages on compile that I didn't read through them all, naively assuming that my IDE would know the problem.

            The problem was that the Font and Text headers referenced each other, and the compiler threw a syntax error on the Text token in the Font header. This was fixed by writing class Text; at the top of the Font header file, as @molbdnilo correctly answered.

            I apologize for my haste in ignoring compilation errors. I'd like to leave this as a message to future readers: CLion 2021.1.1 Build #CL-211.7142.21 was unable to detect this error and semi-incorrectly highlighted the line mentioned below saying the constructor did not exist. The Text constructor could not be parsed because it circularly referenced the Font header.

            The compiler is telling me that a constructor I have declared and defined does not match arguments that seem to match. My IDE recommends using the default constructor, but I have intentionally not defined one.

            I have the following declarations and every member is implemented:

            ...

            ANSWER

            Answered 2021-May-27 at 08:58

            You have a problem because the headers include each other, not despite it.
            Remember that #include is a very primitive mechanism that literally only inserts the contents of a file in a certain place.

            Take this simplified example:

            A.h:

            Source https://stackoverflow.com/questions/67717951

            QUESTION

            How can I check Emojis simultaneously in discord.py re-write?
            Asked 2021-May-20 at 10:13

            I wanted to create a custom help command which uses reactions to show the classes commands. During my tests I noticed that in order to get the 2nd reaction and 2nd message, etc., to work, I first need to trigger the 1st reaction and the 1st message. However, then it would make no sense to create a help command in that way.

            Here is what I want to achieve:

            I want the users to choose what kind of help command/category they want to see, not force them to see them all as they are not always looking for everything.

            What has to be done?

            I would say the way to get it working is to tell the bot that the 1st emoji is for the 1st embed, which I defined, the 2nd for the 2nd embed, the 3rd for the 3rd, etc. It shall not matter which emoji is used first.

            My code so far:

            ...

            ANSWER

            Answered 2021-May-20 at 00:59
            @commands.command()
            async def test1(self, ctx):
            
                embed = Embed(title=f'{self.bot.user.name} - Hilfe', description='**Hinweis:**\n'
                 '`[]`, wenn es für den Command notwendig ist!\n'
                 '`{}`, wenn zwischen ID, Name oder Name#1234 entschieden werden kann\n'
                 '`()`, wenn es nicht benötigt wird, aber genutzt werden kann.\n'
                 'Reagiere auf die Emotes, um die gewünschte Hilfe anzuzeigen!', colour=ctx.author.colour, timestamp=ctx.message.created_at)
                embed.add_field(name='🌍 │- Allgemeine Commands', value='Commands, die jeder Nutzen kann.', inline=False)
                embed.add_field(name='🛠 │- Commands für die Moderation', value='Commands, die Moderatoren unterstützen.', inline=False)
                embed.add_field(name='🔒 │- Commands für Administratoren', value='Nur Administratoren können diese Commands nutzen.', inline=False)
                embed.add_field(name='🎵 │- Music Commands', value='Abfahrt!', inline=False)
                embed.add_field(name='📁 │- andere Commands', value='Commands, die keiner Kategorie wirklich angehören.', inline=False)
                embed.add_field(name='👑 │- Ownercommands', value=f'Commands, die nur {botowner} nutzen können.', inline=False)
                embed.add_field(name='❤ │- Commands, die uns bewerben', value='Commands mit Eigenwerbung', inline=False)
                embed.add_field(name='**Hinweis**', value='Du hast 2 Minuten Zeit zu reagieren. Danach verschwinden die Symbole.', inline=False)
                embed.set_thumbnail(url='https://media4.giphy.com/media/Pn6FasMtzbU0C5licS/giphy.gif')
                embed.set_footer(text=f'Bot by {botowner}', icon_url=avatarowner)
                msg = await ctx.send(embed=embed)
                await msg.add_reaction('🌍')
                await msg.add_reaction('🛠')
                await msg.add_reaction('🔒')
                await msg.add_reaction('🎵')
                await msg.add_reaction('📁')
                await msg.add_reaction('👑')
                await msg.add_reaction('❤')
            
                def check(reaction, user):
                    return user == ctx.author and (str(reaction.emoji) == '🌍' or str(reaction.emoji) == '🛠')
              
                try:
                    reaction, user = await self.bot.wait_for('reaction_add', timeout=120.0, check=check)
                    
                    if str(reaction.emoji) == '🌍':
                        embed = Embed(title='🌍 │- Allgemeine Commands', description='Diese Commands kann in der Regeln jeder nutzen!', colour=ctx.author.colour, timestamp=ctx.message.created_at)
                        embed.add_field(name=f'`{prefix}help`', value='Zeigt das Auswahlfenster der Commands an!', inline=True)
                        embed.add_field(name=f'`{prefix}stats`', value='Zeigt Stats zum Bot an!', inline=True)
                        embed.add_field(name=f'`{prefix}ping`', value='Zeigt den Ping an!', inline=True)
                        embed.set_thumbnail(url='https://media4.giphy.com/media/VI2UC13hwWin1MIfmi/giphy.gif')
                        embed.set_footer(text=f'Bot by {botowner}', icon_url=avatarowner)
                    elif str(reaction.emoji) == '🛠':
                        embed = Embed(title='🛠 │- Commands für die Moderation', description='Diese Commands unterstützen die Moderation.',
                                   colour=ctx.author.colour, timestamp=ctx.message.created_at)
                        embed.add_field(name=f'`{prefix}kick' + '[{Nutzer}]`', value='Kickt Nutzer.', inline=True)
                        embed.add_field(name=f'`{prefix}ban' + '[{Nutzer}]`', value='Bannt Nutzer permanent.', inline=True)
                        embed.add_field(name=f'`{prefix}unban' + '[{Nutzer}]`', value='Entbannt Nutzer.', 
                        embed.set_thumbnail(url='https://i.imgur.com/O3DHIA5.gif')
                        embed.set_footer(text=f'Bot by {botowner}', icon_url=avatarowner)
                    
                    await ctx.send(embed=embed3)
                except asyncio.TimeoutError:
                    await msg.clear_reactions()
                    return
            

            Source https://stackoverflow.com/questions/67611608

            QUESTION

            close a AlertDialog after submit a TextField | Flutter/dart
            Asked 2021-May-16 at 10:42

            I got an AlertDialog with a TextField in it. If I submit my TextField I want the AlertDialog to pop off/ vanish. I tried to add () => Navigator.of(context).pop() to my void on_submitted, but it does not close the AlertDialog :(

            I´m pretty new to flutter and teaching myself to program, so please have some indulgence.

            ...

            ANSWER

            Answered 2021-May-15 at 18:37

            I can't see your addSpieler function, but I'll assume that you are calling Navigator.of(context).pop() inside it. Just correct me and I'll update my answer accordingly.

            Note that, in showDialog, there is a builder parameter of type Widget Function(BuildContext). Every time you want to operate on the dialog context, you should use the context provided by this parameter. You can refactor your code as follows:

            Source https://stackoverflow.com/questions/67549303

            QUESTION

            Splitting Macbeth When a Character Speaks
            Asked 2021-May-15 at 00:27

            After sending a get request to Project Gutenberg I have the play Macbeth in its entirety as a string

            ...

            ANSWER

            Answered 2021-May-14 at 15:53

            Following my comment above

            You might have an easier time of it if you split into lines first, and then split into words, because I expect the abbreviated character names will always be at the start of a line? Also, I notice the line is indented a couple spaces when a new character starts speaking. That could be another thing to look for.

            Split into lines:

            Source https://stackoverflow.com/questions/67536083

            QUESTION

            Jest errors when trying to run TypeScript Tests
            Asked 2021-May-14 at 13:52

            When trying to run my tests in a dual client / server repo, I'm getting the following error that I can't seem to get past.

            ...

            ANSWER

            Answered 2021-May-14 at 13:52

            Turns out this was a weird package-lock.json issue. Wiping away node_modules/ and package-lock.json for a fresh install fixed thing. Not super sure how things got out of wack, but they did somehow.

            Source https://stackoverflow.com/questions/67526531

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install HAST

            You can download it from GitHub.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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            https://github.com/BGI-Qingdao/HAST.git

          • CLI

            gh repo clone BGI-Qingdao/HAST

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            git@github.com:BGI-Qingdao/HAST.git

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