pingpongpro | Find ping-pong signatures in piRNA-Seq data

 by   suhrig C++ Version: v1.0 License: Non-SPDX

kandi X-RAY | pingpongpro Summary

kandi X-RAY | pingpongpro Summary

pingpongpro is a C++ library. pingpongpro has no bugs, it has no vulnerabilities and it has low support. However pingpongpro has a Non-SPDX License. You can download it from GitHub.

Piwi-interacting RNAs (piRNAs) are a class of small non-coding RNAs, predominantly active in the germ line. There, they limit the detrimental effect of transposons on the genome. They do so by forming a complex with Piwi proteins. The complex binds and then cleaves mRNA molecules of active transposons. The resulting mRNA fragments induce the production of more piRNAs, thus reinforcing the anti-trans-poson response in a feed-forward loop called the "ping-pong cycle". A key question in ping-pong cycle research is identification of piRNAs which are amplified through the cycle. PingPongPro is a command-line tool for detecting ping-pong cycle activity in piRNA-Seq data. PingPongPro was developed at the Institute of Molecular Biology gGmbH in Mainz.
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            kandi-support Support

              pingpongpro has a low active ecosystem.
              It has 2 star(s) with 1 fork(s). There are 2 watchers for this library.
              OutlinedDot
              It had no major release in the last 12 months.
              There are 1 open issues and 4 have been closed. On average issues are closed in 24 days. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of pingpongpro is v1.0

            kandi-Quality Quality

              pingpongpro has no bugs reported.

            kandi-Security Security

              pingpongpro has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              pingpongpro has a Non-SPDX License.
              Non-SPDX licenses can be open source with a non SPDX compliant license, or non open source licenses, and you need to review them closely before use.

            kandi-Reuse Reuse

              pingpongpro releases are available to install and integrate.
              Installation instructions are available. Examples and code snippets are not available.

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            pingpongpro Key Features

            No Key Features are available at this moment for pingpongpro.

            pingpongpro Examples and Code Snippets

            No Code Snippets are available at this moment for pingpongpro.

            Community Discussions

            No Community Discussions are available at this moment for pingpongpro.Refer to stack overflow page for discussions.

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install pingpongpro

            Please download the latest release from the [releases page](https://github.com/suhrig/pingpongpro/releases) to obtain pre-compiled binaries and the user manual, which includes detailed documentation of the installation routine, usage and the algorithm.

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            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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          • HTTPS

            https://github.com/suhrig/pingpongpro.git

          • CLI

            gh repo clone suhrig/pingpongpro

          • sshUrl

            git@github.com:suhrig/pingpongpro.git

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