kernel-density | Multivariate kernel density estimation

 by   timnugent C++ Version: Current License: GPL-3.0

kandi X-RAY | kernel-density Summary

kandi X-RAY | kernel-density Summary

kernel-density is a C++ library. kernel-density has no bugs, it has no vulnerabilities, it has a Strong Copyleft License and it has low support. You can download it from GitHub.

(c) Tim Nugent 2014. Based on Philipp K. Janert's Perl module: Multivariate stuff from here: Compile by running 'make'. Uses -std=c++11 - on older compilers you may need to change this to -std=c++0x in the Makefile. Run all tests with 'make test'. This calls an R script which generates plots from various .csv file. The multivariate data in the data/ directory is the Old Faithful geyser eruption/waiting data.
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              kernel-density has a low active ecosystem.
              It has 39 star(s) with 11 fork(s). There are 5 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              There are 1 open issues and 0 have been closed. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of kernel-density is current.

            kandi-Quality Quality

              kernel-density has 0 bugs and 0 code smells.

            kandi-Security Security

              kernel-density has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              kernel-density code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              kernel-density is licensed under the GPL-3.0 License. This license is Strong Copyleft.
              Strong Copyleft licenses enforce sharing, and you can use them when creating open source projects.

            kandi-Reuse Reuse

              kernel-density releases are not available. You will need to build from source code and install.
              Installation instructions are not available. Examples and code snippets are available.

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            Community Discussions

            QUESTION

            Unequal length of x,y upon using polygon to share area under curve
            Asked 2021-Nov-11 at 16:18

            I tried to model this question in order to have a portion of a curve shaded between two values. My code is:

            ...

            ANSWER

            Answered 2021-Nov-11 at 16:18

            You're almost there. You need to select the subset of dens where dens$x lies between x1 and x2.

            Source https://stackoverflow.com/questions/69931096

            QUESTION

            Shaded area under different density curves (grouping factor) in the same plot
            Asked 2020-Oct-07 at 16:20

            I am trying to plot a density line with and want to shade or fill only the area associated with the 95% of the x axis. I am trying to follow answers given in the attached answers, but non of them talk about shading an area when we are plotting more than one distributions at the same time with a grouping factor. In this case the grouping factor is the different central electrodes ("Fz", "Cz, "Pz"). I am trying to visualise something similar to the highest density interval, or the area under the curve comprising between percentile 5 and 95.

            Area Under Curve AUC by Group

            My data looks something like this:

            ...

            ANSWER

            Answered 2020-Oct-07 at 16:20

            Since you need to do some maths on the density curves to work out where the 95% intervals are, it is best to do this outside ggplot. I often find that people run into problems because they try to get ggplot to do too much of their data wrangling and summarizing. It is often easier to work out what you want to plot, then plot it.

            In your case, your x and y co-ordinates already represent densities. For each Electrode, you just need to create a logical vector that tells you when the integral of the density is between 0.025 and 0.975, so that you can easily subset out the 95% confidence interval. You can do that using the split-aplly-bind method like this:

            Source https://stackoverflow.com/questions/64227409

            QUESTION

            Plotly: How to show both a normal distribution and a kernel density estimation in a histogram?
            Asked 2020-Oct-06 at 13:55

            For a plotly figure factory distribution plot, the default distribution is kde (kernel density estimation):

            You can override the default by setting curve = 'normal' to get:

            But how can you show both kde and the normal curve in the same plot? Assigning a list like curve_type = ['kde', 'normal'] will not work.

            Complete code: ...

            ANSWER

            Answered 2020-Sep-13 at 12:04

            The easiest thing to do is build another figure fig2 with curve_type = 'normal' and pick up the values from there using:

            Source https://stackoverflow.com/questions/63865209

            QUESTION

            How to find inflection points in a Kernel density plot in R?
            Asked 2020-Jul-09 at 14:27

            I am trying to find the x-values of the inflection points in the curve of a Kernel density plot that I computed with the density() function.

            I found the following answered question helpful in finding the turning points:

            How to find all the turning points on a kernel density curve when window width varies.

            So I would think there must be a way to fnd the x-values of the inflection points, too. Would be great if somene has a tipp.

            ...

            ANSWER

            Answered 2020-Jul-09 at 14:27

            By definition, an inflection point is the point where the second derivative of the function equals zero. In the practice, this means that an inflection point will be a point where the slope passes from increasing to decreasing, or v.v. Using this definition, I came with this approximate and non-automatic approach: Let's say that you have a dataframe, that I will call all, which contains the x-values in the first column, and the result of the density computation in the second one. From this dataframe, we can calculate the slope of two consecutive points like this :

            Source https://stackoverflow.com/questions/62811135

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