kernel-density | Multivariate kernel density estimation
kandi X-RAY | kernel-density Summary
kandi X-RAY | kernel-density Summary
(c) Tim Nugent 2014. Based on Philipp K. Janert's Perl module: Multivariate stuff from here: Compile by running 'make'. Uses -std=c++11 - on older compilers you may need to change this to -std=c++0x in the Makefile. Run all tests with 'make test'. This calls an R script which generates plots from various .csv file. The multivariate data in the data/ directory is the Old Faithful geyser eruption/waiting data.
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QUESTION
I tried to model this question in order to have a portion of a curve shaded between two values. My code is:
...ANSWER
Answered 2021-Nov-11 at 16:18You're almost there. You need to select the subset of dens
where dens$x
lies between x1 and x2.
QUESTION
I am trying to plot a density line with and want to shade or fill only the area associated with the 95% of the x axis. I am trying to follow answers given in the attached answers, but non of them talk about shading an area when we are plotting more than one distributions at the same time with a grouping factor. In this case the grouping factor is the different central electrodes ("Fz", "Cz, "Pz"). I am trying to visualise something similar to the highest density interval, or the area under the curve comprising between percentile 5 and 95.
My data looks something like this:
...ANSWER
Answered 2020-Oct-07 at 16:20Since you need to do some maths on the density curves to work out where the 95% intervals are, it is best to do this outside ggplot. I often find that people run into problems because they try to get ggplot to do too much of their data wrangling and summarizing. It is often easier to work out what you want to plot, then plot it.
In your case, your x and y co-ordinates already represent densities. For each Electrode, you just need to create a logical vector that tells you when the integral of the density is between 0.025 and 0.975, so that you can easily subset out the 95% confidence interval. You can do that using the split-aplly-bind method like this:
QUESTION
For a plotly figure factory distribution plot, the default distribution is kde
(kernel density estimation):
You can override the default by setting curve = 'normal'
to get:
But how can you show both kde and the normal curve in the same plot? Assigning a list like curve_type = ['kde', 'normal']
will not work.
ANSWER
Answered 2020-Sep-13 at 12:04The easiest thing to do is build another figure fig2
with curve_type = 'normal'
and pick up the values from there using:
QUESTION
I am trying to find the x-values of the inflection points in the curve of a Kernel density plot that I computed with the density() function.
I found the following answered question helpful in finding the turning points:
How to find all the turning points on a kernel density curve when window width varies.
So I would think there must be a way to fnd the x-values of the inflection points, too. Would be great if somene has a tipp.
...ANSWER
Answered 2020-Jul-09 at 14:27By definition, an inflection point is the point where the second derivative of the function equals zero. In the practice, this means that an inflection point will be a point where the slope passes from increasing to decreasing, or v.v. Using this definition, I came with this approximate and non-automatic approach:
Let's say that you have a dataframe, that I will call all
, which contains the x-values in the first column, and the result of the density computation in the second one. From this dataframe, we can calculate the slope of two consecutive points like this :
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