Mamba | PS3 apps that adds support | Hacking library
kandi X-RAY | Mamba Summary
kandi X-RAY | Mamba Summary
MAMBA + PS3M_API + PS2 ISO + PSP ISO SUPPORT = COBRA :D. Version of mamba that includes ps3m_api_core by NzV and ps2, psp iso support by Ps3ita Team. To boot MAMBA on startup of REBUG 4.84.2 REX / DREX, disable Cobra payload and add the path of the MAMBA payload file to: /dev_hdd0/boot_plugins_kernel_nocobra.txt or /dev_hdd0/boot_plugins_kernel_nocobra_dex.txt. For IRISMAN copy the MAMBA payload files to the folder: /dev_hdd0/game/IRISMAN00/USRDIR/mamba. To update MAMBA/PRX Loader copy the MAMBA payload files to the folder: /dev_hdd0/game/MAMBAPRXL/USRDIR/mamba. To avoid freezes on the Backup Managers use NzV mamba/prx loader to install mamba payload.
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Trending Discussions on Mamba
QUESTION
I am using snakemake as workflow manager. I first create a conda environment in JupyterLab (anaconda) with: conda create base
. Then I activate a .yaml
file with mamba env create --name --file environment.yaml
. In the .yaml file I include among other the following dependencies: R = 4.1.3, tensorflow = 2.8.0
. At this point I get an error message:
Encountered problems while solving:
- nothing provides requested r 4.1.3**
- nothing provides requested tensorflow 2.8.0**.
As far as I understand, the dependencies are going to be take care of by conda in the local environment. I eventually installed manually tensorflow
in the local environment with pip install tensorflow.
Nevertheless, I get the same error message when I try to activate the .yaml file. I know that I have already installed R
.
What should I do ? I have Ubuntu 20.04.4 LTS.
Many thanks.
...ANSWER
Answered 2022-Apr-14 at 10:39Packages are not found because the current highest versions of tensorflow from conda is 2.7.0 and the highest available for R is 4.1.0, so you have to downgrade if you want to install using conda.
For tensorflow, you can tell conda to use pip instead, but I don't know if there is a similar workaround for R.
Edit: Fixed R version
QUESTION
I have a multi-stage Dockerfile for a JupyterLab image. There are three stages:
server
kernel
:mamba create -y -n /tmp/kernel-packages/myenv ...
runner
:
ANSWER
Answered 2022-Mar-22 at 17:03The --prefix
argument is the equivalent - just that some Conda packages use hardcoded paths, hence the issue you encounter.
conda-prefix-replacement
To properly move a Conda environment to a new prefix via a COPY operation one would need to run the conda-prefix-replacement
tool (a.k.a., cpr
) to ensure that all files with hardcoded paths get updated to the new location. Presumably, conda-pack
is doing a similar thing, just under-the-hood.
For your purposes, you might consider pre-running cpr
on the environment(s) in the kernel image so that they are ready to work in the deployed location. Though that would mean always COPYing to the same location.
See the cpr
repository for details on use.
QUESTION
I'm trying to create a new conda enviornment with tensorflow (GPU), version 1.4.1 with the following command conda create -n parsim_1.4.1 python=3 tensorflow-gpu=1.4.1
.
However, it prints a weird conflict:
...ANSWER
Answered 2022-Mar-21 at 19:44Conda's error reporting isn't always helpful. Mamba is sometimes better, and in this particular case it gives:
QUESTION
I'd like to build a container using Podman which would contains the following:
- a Python application
- the Python modules I developed but which are not stored at the same place than the Python application
- the Python environment (made with miniconda/mambaforge)
- a mounted folder for input data
- a mounted folder for output data
To do that, I've added a Dockerfile in my home directory. I had to put the Dockerfile at a such high path level because it seems that it needs to be above any folder I want to add in the container. Indeed, I've tried to add folders using rising path with "../../some/path/" but it doesn't work. Then, a first question is: Is there a solution to add folders which are not below (in path) the Dockerfile?
Below is the content of the Dockerfile:
...ANSWER
Answered 2022-Feb-23 at 09:55Solutions were given in comments. Here is a summary:
Is there a solution to add folders which are not below (in path) the Dockerfile? No, not allowing ADD ../some/path/ is due to security reasons.
How to mount volumes in a container? The order of the arguments was not correct. The option -v
needs to come before the image name. The following command works fine:
QUESTION
I am looking for an environment variable I can set to make mamba verbose while it is resolving the dependency to see if it is stuck at a certain stage.
...ANSWER
Answered 2022-Feb-11 at 17:58This can be done either through Conda configuration (i.e., .condarc
) or an environment variable. The environment variable has the highest priority, so I recommend setting default behavior via the configuration such that the environment variable is still available for overriding.
There is an (older) article detailing the Conda configuration system: "The Conda Configuration Engine for Power Users".
Conda ConfigurationThe configuration variable is verbosity. Here is the description:
QUESTION
I am trying to get xeus-cling to work on a OCI image, currently I am using buildah + podman. I run into two problems
- I try to create an environment with mamba/conda, however it needs
conda/mamba init bash
too run then to restart the shell. But its hard to get it to restart while its building, I have tried building multistage images,exit
, running/bin/bash
. I noticedconda
checks too see if certain files are configured in a certain way, including/home/joyvan/.bashrc
, Icat
'd out the modified.bashrc
andCOPY
'd it too the image -- no dice.activate
tells me I need to runinit
- I have tried installing it without the environment, I keep getting the error
ANSWER
Answered 2022-Jan-14 at 16:38Starting from the same image, a minimal working example of Jupyter with xeus-cling
kernel capabilities is:
Dockerfile
QUESTION
I'd like to ask a question about how to configure setup.py
with Cython, setuptools extensions etc. I'm trying cythonize a submodule with Cython.Distutils
's build_ext
. But the issue isn't Cython.Distutils
's Extentsion module, (if it exists) because it isn't loaded. Only build_ext
. So I create a setuptools.extension
Extension in a list, and then cythonize the list of Extension objects. There's only one Extension in the list, an its as follows.
ANSWER
Answered 2022-Jan-27 at 19:26I'm going to self answer here. The issue stemmed from an improperly specified Extension.
QUESTION
Okay so firstly I read some posts on this topic. That is how I ended up with my solution. Still I don’t find my mistake. Also I am more of a beginner.
So this is my docker file:
...ANSWER
Answered 2022-Jan-25 at 11:32As Saeed pointed out already, there is reason to believe you did not place your cron.sh script inside the container.
On top of that cron is programmed such that it does not log failed invocations anywhere. You can try to turn on some debug logging (I almost had to search cron's source to find the right settings years ago). Finally cron will send it's debug output to syslog - but in your container only cron is running, so the log entries are probably lost on that stage again.
That ultimately means you are in the dark and need to find the needle. But installing the script is a first good attempt.
QUESTION
** Conda Fails to Create a new env: stuck at "Executing transaction"**
I am working with a MacOS, BigSur 11.6, and have updated conda and mamba
conda update --all
conda update mamba
and, following guidance from a software installation guide I tried to create a new env:
conda create -n fermi -c conda-forge -c fermi fermitools python=3 clhep=2.4.4.1
Also tried with the dev version:
conda create -n fermi-2.0.24 -c conda-forge -c fermi/label/dev fermitools=2.0.24
and with mamba
mamba create -n fermi -c conda-forge -c fermi fermitools python=3 clhep=2.4.4.1
All trials get stuck in " executing transaction \ " (> 1h)
when hitting ctrl+c, all trials show the same error msg:
" ERROR conda.core.link:_execute(699): An error occurred while installing package 'conda-forge::gdk-pixbuf-2.42.6-h2e6141f_0'. " " Rolling back transaction: done "
my uname -v:
Darwin Kernel Version 20.6.0: Mon Aug 30 06:12:21 PDT 2021; root:xnu-7195.141.6~3/RELEASE_X86_64
my conda --version
conda 4.10.3
There seems to be a long standing discussion about similar issues here. Some argue that hitting "enter" solved the problem after " executing transaction \ " was running for a long time. It would be great, but did not worked.
The issue #6986 seems to persist and it is not clear how to deal with it.
Any ideas on how to approach this? Thank you in advance!
...ANSWER
Answered 2022-Jan-23 at 05:56Looking for resources on the error " Solving environment: failed with current_repodata.json, will retry with next repodata source. "
Then, reading: link1 , link2 , link3 (check the comment from "glass-ships") , link4
It seems the following can help:
conda update conda -c conda-canary
conda config --set channel_priority false
conda create --name your_env_name
conda activate your_env_name
conda install XXXXXX
then conda activate your_env_name
and the tool is working just fine.
QUESTION
I need to create env with
mamba create --name tf1_12__HDR Tensorflow==1.12.0 Keras==2.2.4 opencv-python==3.4.4.19 anaconda
It provides
...ANSWER
Answered 2021-Nov-08 at 15:53PyPI and Anaconda Cloud packages don't necessarily go by the same names. The opencv
package from Conda Forge will include the OpenCV libs (libopencv
) and the Python interface (py-opencv
). That is, install opencv
with the version you want.
BTW, as mentioned in the comments ==
is Pip syntax, Conda/Mamba use single =
.
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