plink-ng | comprehensive update to the PLINK association analysis | Code Analyzer library

 by   chrchang C Version: v2.00a4.2 License: No License

kandi X-RAY | plink-ng Summary

kandi X-RAY | plink-ng Summary

plink-ng is a C library typically used in Code Quality, Code Analyzer applications. plink-ng has no bugs, it has no vulnerabilities and it has low support. You can download it from GitHub.

Usage questions should be posted in the plink2-users Google group ().
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              plink-ng has a low active ecosystem.
              It has 346 star(s) with 118 fork(s). There are 28 watchers for this library.
              OutlinedDot
              It had no major release in the last 12 months.
              There are 24 open issues and 180 have been closed. On average issues are closed in 199 days. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of plink-ng is v2.00a4.2

            kandi-Quality Quality

              plink-ng has no bugs reported.

            kandi-Security Security

              plink-ng has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              plink-ng does not have a standard license declared.
              Check the repository for any license declaration and review the terms closely.
              OutlinedDot
              Without a license, all rights are reserved, and you cannot use the library in your applications.

            kandi-Reuse Reuse

              plink-ng releases are available to install and integrate.

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            plink-ng Key Features

            No Key Features are available at this moment for plink-ng.

            plink-ng Examples and Code Snippets

            No Code Snippets are available at this moment for plink-ng.

            Community Discussions

            QUESTION

            Singularity containers: adding custom packages to $PATH and pass it to singularity exec
            Asked 2019-Jul-04 at 08:12

            I'm in the process of making a singularity container with PLINK v 1.9 (a genetics software, not the PuTTY interface, https://www.cog-genomics.org/plink/1.9/dev) inside it. I'm able to successfully compile the software within the container and I can see the PLINK files and functions when I shell into the container. To make things easier for my end users, I am trying to add the software's main folder to the singularity $PATH so that they can just call plink from the command line, but I'm not able to achieve this.

            So far I have tried:

            1. Assigning SINGULARITYENV_APPEND_PATH=path/to/plink in the %runscript section of my singularity recipe file.
            2. Moving the source code folder for Plink into /usr/local/bin of the Singularity
            3. Setting a variable PLINKDIR=/path/to/plink and the export it in the %environment section of my recipe file similar to what they have done here.

            None of these methods work. The only way I can access this package is by spelling out the full path in my singularity exec command.

            ...

            ANSWER

            Answered 2019-Feb-28 at 21:28

            You should be able to just add it to your path:

            Source https://stackoverflow.com/questions/54914587

            QUESTION

            Why are un-requested packages removed (docker build)?
            Asked 2019-Mar-28 at 18:03

            So, I'm building my docker with the following Dockerfile

            ...

            ANSWER

            Answered 2019-Mar-28 at 18:03

            It sounds as if unzip is a dependency of the R package. Since you are asking apt to remove unzip, it will also need to remove anything that depends on unzip. This is typical behavior for a package manager.

            You can see the dependency tree for a package with the apt-cache dotty command, which will output the dependencies in dot format. Running apt-cache dotty r-base shows:

            Source https://stackoverflow.com/questions/55386670

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install plink-ng

            You can download it from GitHub.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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