libBigWig | A C library for handling bigWig files
kandi X-RAY | libBigWig Summary
kandi X-RAY | libBigWig Summary
libBigWig is a C library. libBigWig has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. You can download it from GitHub.
A C library for reading/parsing local and remote bigWig and bigBed files. While Kent's source code is free to use for these purposes, it's really inappropriate as library code since it has the unfortunate habit of calling exit() whenever there's an error. If that's then used inside of something like python then the python interpreter gets killed. This library is aimed at resolving these sorts of issues and should also use more standard things like curl and has a friendlier license to boot.
A C library for reading/parsing local and remote bigWig and bigBed files. While Kent's source code is free to use for these purposes, it's really inappropriate as library code since it has the unfortunate habit of calling exit() whenever there's an error. If that's then used inside of something like python then the python interpreter gets killed. This library is aimed at resolving these sorts of issues and should also use more standard things like curl and has a friendlier license to boot.
Support
Quality
Security
License
Reuse
Support
libBigWig has a low active ecosystem.
It has 58 star(s) with 22 fork(s). There are 5 watchers for this library.
It had no major release in the last 12 months.
There are 3 open issues and 21 have been closed. On average issues are closed in 25 days. There are no pull requests.
It has a neutral sentiment in the developer community.
The latest version of libBigWig is 0.4.6
Quality
libBigWig has no bugs reported.
Security
libBigWig has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
License
libBigWig is licensed under the MIT License. This license is Permissive.
Permissive licenses have the least restrictions, and you can use them in most projects.
Reuse
libBigWig releases are available to install and integrate.
Installation instructions are not available. Examples and code snippets are available.
Top functions reviewed by kandi - BETA
kandi's functional review helps you automatically verify the functionalities of the libraries and avoid rework.
Currently covering the most popular Java, JavaScript and Python libraries. See a Sample of libBigWig
Currently covering the most popular Java, JavaScript and Python libraries. See a Sample of libBigWig
libBigWig Key Features
No Key Features are available at this moment for libBigWig.
libBigWig Examples and Code Snippets
Copy
#include "bigWig.h"
int main(int argc, char *argv[]) {
bigWigFile_t *fp = NULL;
char *chroms[] = {"1", "2"};
char *chromsUse[] = {"1", "1", "1"};
uint32_t chrLens[] = {1000000, 1500000};
uint32_t starts[] = {0, 100, 125,
Copy
#include "bigWig.h"
int main(int argc, char *argv[]) {
bigWigFile_t *fp = NULL;
bwOverlappingIntervals_t *intervals = NULL;
double *stats = NULL;
if(argc != 2) {
fprintf(stderr, "Usage: %s {file.bw|URL://path/file.bw}\n", argv
Copy
table RnaElements
"BED6 + 3 scores for RNA Elements data "
(
string chrom; "Reference sequence chromosome or scaffold"
uint chromStart; "Start position in chromosome"
uint chromEnd; "End position in chromosome"
string
Community Discussions
Trending Discussions on libBigWig
QUESTION
grep pattern in LD_LIBRARY_PATH
Asked 2018-Apr-11 at 16:41
I want to export a folder to LD_LIBRARY_PATH but only once. I tried the following to determine if the folder was already present
...ANSWER
Answered 2018-Apr-11 at 16:41You could try something like:
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
No vulnerabilities reported
Install libBigWig
You can download it from GitHub.
Support
Support for accessing bigBed files was added in version 0.3.0. The function names used for accessing bigBed files are similar to those used for bigWig files. Other functions, such as bwClose and bwInit, are shared between bigWig and bigBed files. See test/testBigBed.c for a full example.
Find more information at:
Reuse Trending Solutions
Find, review, and download reusable Libraries, Code Snippets, Cloud APIs from over 650 million Knowledge Items
Find more librariesStay Updated
Subscribe to our newsletter for trending solutions and developer bootcamps
Share this Page