popPhylABC | Scripts used for ABC analysis
kandi X-RAY | popPhylABC Summary
kandi X-RAY | popPhylABC Summary
popPhylABC is a C library. popPhylABC has no bugs, it has no vulnerabilities and it has low support. You can download it from GitHub.
Datasets from the popPhyl project: Converting fasta files into input for ABC analysis: popPhyl2ABC_v2.py. This code depends on the C++ library libsequence by calling polydNdS to get synonymous positions. An incompatibility had been reported with version of libsequence >2.0 !!! To compile mscalc, the calculator of statistics: gcc *.c -lm -o mscalc. To compile msnsam, the coalescent simulator (Ross-Ibarra et al, 2008): ./clms. The following programs have to be linked to your bin/ : mscalc priorgen.py msnsam popPhyl2ABC_v2.py polydNdS.
Datasets from the popPhyl project: Converting fasta files into input for ABC analysis: popPhyl2ABC_v2.py. This code depends on the C++ library libsequence by calling polydNdS to get synonymous positions. An incompatibility had been reported with version of libsequence >2.0 !!! To compile mscalc, the calculator of statistics: gcc *.c -lm -o mscalc. To compile msnsam, the coalescent simulator (Ross-Ibarra et al, 2008): ./clms. The following programs have to be linked to your bin/ : mscalc priorgen.py msnsam popPhyl2ABC_v2.py polydNdS.
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Support
popPhylABC has a low active ecosystem.
It has 1 star(s) with 3 fork(s). There are 1 watchers for this library.
It had no major release in the last 6 months.
popPhylABC has no issues reported. There are 1 open pull requests and 0 closed requests.
It has a neutral sentiment in the developer community.
The latest version of popPhylABC is current.
Quality
popPhylABC has no bugs reported.
Security
popPhylABC has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
License
popPhylABC does not have a standard license declared.
Check the repository for any license declaration and review the terms closely.
Without a license, all rights are reserved, and you cannot use the library in your applications.
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popPhylABC releases are not available. You will need to build from source code and install.
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Currently covering the most popular Java, JavaScript and Python libraries. See a Sample of popPhylABC
Currently covering the most popular Java, JavaScript and Python libraries. See a Sample of popPhylABC
popPhylABC Key Features
No Key Features are available at this moment for popPhylABC.
popPhylABC Examples and Code Snippets
No Code Snippets are available at this moment for popPhylABC.
Community Discussions
No Community Discussions are available at this moment for popPhylABC.Refer to stack overflow page for discussions.
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
No vulnerabilities reported
Install popPhylABC
You can download it from GitHub.
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For any new features, suggestions and bugs create an issue on GitHub.
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