pairedRepetitions | Computes paired and unpaired exact repetitions

by rchikhi C Version: Current License: No License

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kandi X-RAY | pairedRepetitions Summary

pairedRepetitions is a C library. pairedRepetitions has no bugs, it has no vulnerabilities and it has low support. You can download it from GitHub.

Computes the ratio of exact, paired (and unpaired) repeated reads within a genome. Inspired by Nava Whiteford work on exact unpaired repetitions (Whiteford et al, 2005). Details of the algorithm are in Rayan Chikhi's PhD thesis (2012), and the following abstract: Citation: R. Chikhi, D. Lavenier. Paired-end read length lower bounds for genome re-sequencing. (Meeting Abstract) BMC Bioinformatics 2009, 10(Suppl 13):O2.

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pairedRepetitions has a low active ecosystem.

It has 3 star(s) with 3 fork(s). There are 2 watchers for this library.

It had no major release in the last 6 months.

pairedRepetitions has no issues reported. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of pairedRepetitions is current.

Quality

pairedRepetitions has no bugs reported.

Security

pairedRepetitions has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

pairedRepetitions does not have a standard license declared.

Check the repository for any license declaration and review the terms closely.

Without a license, all rights are reserved, and you cannot use the library in your applications.

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pairedRepetitions releases are not available. You will need to build from source code and install.

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pairedRepetitions Key Features

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pairedRepetitions Examples and Code Snippets

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You can download it from GitHub.

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