5 best C++ Genomics libraries in 2024
by marketing.admin@openweaver.com Updated: Feb 2, 2023
Guide Kit
C++ is an object-oriented programming language that is fast, efficient, and powerful. C++ is one of the most popular languages for implementing and distributing bioinformatics software. Genomics is the study of genes and their functions. It includes the sequencing and analysis of genomes, which are complete sets of DNA within a single cell of an organism. In the field of genomics, with the proliferation of next-generation sequencing (NGS), the amount of DNA sequence data generated has increased exponentially. This has led to the development of new tools and algorithms to handle these enormous levels of data. Several open source libraries have been created that allow developers to quickly and easily build genomic analysis tools without having to start from scratch. There are several popular C++ Genomics open source libraries available for developers: nucleus - Python and C code for reading and writing genomics data; abyss - Assemble large genomes using short reads; vcftools - A set of tools written in Perl and C for working with VCF files, such as those generated by the 1000 Genomes Project.
nucleusby google
Python and C++ code for reading and writing genomics data.
nucleusby google
C++ 734 Version:0.6.0 License: Others (Non-SPDX)
vcftoolsby vcftools
A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project.
vcftoolsby vcftools
C++ 420 Version:v0.1.16 License: Weak Copyleft (LGPL-3.0)
regenieby rgcgithub
regenie is a C++ program for whole genome regression modelling of large genome-wide association studies.
regenieby rgcgithub
C++ 132 Version:v3.2.7 License: Others (Non-SPDX)
GenomicsDBby GenomicsDB
Highly performant data storage for importing, querying and transforming variant data.
GenomicsDBby GenomicsDB
C++ 81 Version:v1.5.0 License: Others (Non-SPDX)