gtf | gtf - a useful set of Golang Template Functions | Widget library

by leekchan Go Version: Current License: MIT

X-Ray Key Features Code Snippets(1)Community Discussions(10)Vulnerabilities Install Support

kandi X-RAY | gtf Summary

gtf is a Go library typically used in User Interface, Widget applications. gtf has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. You can download it from GitHub.

gtf is a useful set of Golang Template Functions. The goal of this project is implementing all built-in template filters of Django & Jinja2.

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Quality

Security

License

Reuse

Support

gtf has a low active ecosystem.

It has 310 star(s) with 19 fork(s). There are 8 watchers for this library.

It had no major release in the last 6 months.

There are 1 open issues and 0 have been closed. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of gtf is current.

Quality

gtf has 0 bugs and 0 code smells.

Security

gtf has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

gtf code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

gtf is licensed under the MIT License. This license is Permissive.

Permissive licenses have the least restrictions, and you can use them in most projects.

Reuse

gtf releases are not available. You will need to build from source code and install.

Installation instructions are not available. Examples and code snippets are available.

It has 753 lines of code, 15 functions and 3 files.

It has low code complexity. Code complexity directly impacts maintainability of the code.

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gtf Key Features

No Key Features are available at this moment for gtf.

gtf Examples and Code Snippets

Load the GTF file .

python

Lines of Code : 6

License : Permissive (MIT License)

Copy

def load_annotations(self):
        assert self.data_type == 'mot'

        gt_filename = os.path.join(self.data_root, self.seq_name, 'gt', 'gt.txt')
        self.gt_frame_dict = read_results(gt_filename, self.data_type, is_gt=True)
        self.gt_i

Community Discussions

Trending Discussions on gtf

Merging two rules to one rule with wildcards/dictionary

AttributeError: 'DataParallel' object has no attribute 'copy'

Find specific words after a match

How to read compressed TSV files (*.gtf.gz) with rust-polars?

Add column at beginning of file using awk

Bash Scripting custom output

Pandas Python groupby multiple columns - sort rows by values in column 2 based on column one having a specific value

can only concatenate str (not "bytes") to str

cellranger: how to convert a gtf file to string

Snakemake: trimmomatic wrapper attribute error

QUESTION

Merging two rules to one rule with wildcards/dictionary

Asked 2021-Dec-27 at 14:23

I am mapping and counting sequences that are mixed from two species. I have two rules in my pipeline because each specie has it's own GTF file. I would like to be able to merge this into one rule, and then have the specie wildcard dictate which GTF file to use (using a dictionary for example). These are the rules:

...

ANSWER

Answered 2021-Dec-27 at 14:23

Figured it out. Need to use lambda:

Source https://stackoverflow.com/questions/70496543

QUESTION

AttributeError: 'DataParallel' object has no attribute 'copy'

Asked 2021-Dec-22 at 22:43

I am trying to resume training monkAI pytorch retinanet. I have loaded with .pt file instead of actual model. The changes are made in Monk_Object_Detection/5_pytorch_retinanet/lib/train_detector.py, check for '# change' in the places where its modified.

...

ANSWER

Answered 2021-Dec-22 at 22:43

I found this by simply googling your problem:

retinanet.load_state_dict(torch.load('filename').module.state_dict())

The link to the discussion is here.

Source https://stackoverflow.com/questions/70451021

QUESTION

Find specific words after a match

Asked 2021-Dec-19 at 09:00

I have a dataset that looks something like this:

...

ANSWER

Answered 2021-Dec-19 at 09:00

Use:

Source https://stackoverflow.com/questions/70406668

QUESTION

How to read compressed TSV files (*.gtf.gz) with rust-polars?

Asked 2021-Oct-19 at 14:21

Complete rust beginner here coming from python. I would like to use rust-polars to read a compressed GTF (*.gtf.gz) file:

...

ANSWER

Answered 2021-Oct-19 at 14:21

Hi there are a few questions here at once. I will try to answer the ones I can.

How to tell Polars that the file is compressed?

You don't have to. You only have to compile polars with the decompress or decompress-fast feature flag. (The firs one is rust native, the latter needs a c-compiler).

How to parse Categorical columns

You set the schema to DataType::Categorical, or you first parse as Utf8 and then cast later.

Source https://stackoverflow.com/questions/69418616

QUESTION

Add column at beginning of file using awk

Asked 2021-Sep-07 at 21:08

I have a very simple one liner that works almost perfectly. I want to add a new column to a file that says "non coding or coding" depending on conditions on columns 12 and 3 (if column 12 has substring RNA or mir- and/or column 3 == "pseudogene then column 1 should read non-coding else coding).

...

ANSWER

Answered 2021-Sep-02 at 03:57

You can (effectively) prepend a new column by converting $1 into something OFS $1. You aren't really creating a new column ($2 still refers to the original second column and $1 refers to "both" new columns) but that is not important in this case:

Source https://stackoverflow.com/questions/69021220

QUESTION

Bash Scripting custom output

Asked 2021-Aug-11 at 13:39

I'm beginner in Bash Scripting and I need to assign to a variable a custom command output,not the entire command just a part of it.Is there a way I can do that?
The command:

...

ANSWER

Answered 2021-Aug-11 at 11:53

You can enclose your command in backticks to store its output:

Source https://stackoverflow.com/questions/68741335

QUESTION

Pandas Python groupby multiple columns - sort rows by values in column 2 based on column one having a specific value

Asked 2021-Jul-02 at 23:11

I have a data set where I have a few thousand records. The columns are acct number, code, data.

I need to sort the entire rows based on the code(column 2) if they have the same acct number(column1). so something like this.

...

ANSWER

Answered 2021-Jul-02 at 22:35

The last question you linked made your question clearer. Create an Order column, sort by it, and drop it. You can determine the order in the dictionary.

Source https://stackoverflow.com/questions/68231738

QUESTION

can only concatenate str (not "bytes") to str

Asked 2021-Jun-06 at 12:19

I am using a cellranger mkref and faced with a strange python problem with GTF (custom gtf file):

...

ANSWER

Answered 2021-May-26 at 21:50

Python 3 treats strings of bytes as a different object from strings of characters. The distinction matters, since a given string of characters can be encoded to bytes in different ways. E.g. in UTF-8, ä is the two bytes c3 a4 (in hex), while in ISO-8859-1 (Latin 1), it's just the single byte e4.

Like the comment from @Theophrastus says, subprocess.check_output() returns bytes, matching the low-level API. You need to decode it to characters based on what the expected encoding is. E.g.

Source https://stackoverflow.com/questions/67859031

QUESTION

cellranger: how to convert a gtf file to string

Asked 2021-Jun-01 at 20:27

I am using a cellranger mkref and faced with a strange python problem with GTF (custome gtf):

...

ANSWER

Answered 2021-Jun-01 at 20:27

I encountered the same issue. The problem was in duplicated IDs in my GTF file. Removing those duplicates solved the issue. See the discussion on Cellranger GitHub: https://github.com/10XGenomics/cellranger/issues/125

Source https://stackoverflow.com/questions/67706086

QUESTION

Snakemake: trimmomatic wrapper attribute error

Asked 2021-Apr-29 at 23:51

I have a snakemake pipeline that looks like this:

...

ANSWER

Answered 2021-Apr-29 at 23:51

The expand function returns a list. By setting the input files to a list instead of a string, you are confusing the script. For defining r1 and r2, you should use something that returns a string instead. I would suggest the string's format() function or an f-string.

Change:

Source https://stackoverflow.com/questions/67324889

Community Discussions, Code Snippets contain sources that include Stack Exchange Network