fhir-server | A fast , open source , HL7 FHIR server | Data Manipulation library

 by   mitre Go Version: Current License: Apache-2.0

kandi X-RAY | fhir-server Summary

kandi X-RAY | fhir-server Summary

fhir-server is a Go library typically used in Utilities, Data Manipulation applications. fhir-server has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. You can download it from GitHub.

A fast, open source, HL7 FHIR server
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              fhir-server has a low active ecosystem.
              It has 26 star(s) with 9 fork(s). There are 6 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              fhir-server has no issues reported. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of fhir-server is current.

            kandi-Quality Quality

              fhir-server has 0 bugs and 0 code smells.

            kandi-Security Security

              fhir-server has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              fhir-server code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              fhir-server is licensed under the Apache-2.0 License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              fhir-server releases are not available. You will need to build from source code and install.
              Installation instructions are not available. Examples and code snippets are available.
              It has 14 lines of code, 1 functions and 1 files.
              It has low code complexity. Code complexity directly impacts maintainability of the code.

            Top functions reviewed by kandi - BETA

            kandi has reviewed fhir-server and discovered the below as its top functions. This is intended to give you an instant insight into fhir-server implemented functionality, and help decide if they suit your requirements.
            • main server
            Get all kandi verified functions for this library.

            fhir-server Key Features

            No Key Features are available at this moment for fhir-server.

            fhir-server Examples and Code Snippets

            No Code Snippets are available at this moment for fhir-server.

            Community Discussions

            QUESTION

            Import patients in Bundle to FHIR server
            Asked 2020-Dec-02 at 20:17

            I'm trying to import a Bundle of Patient resources to a FHIR server using cURL. Here's my command and the response:

            ...

            ANSWER

            Answered 2020-Dec-02 at 20:17

            According the standard, when you post the bundle to [base]/Bundle, you are asking the server to store the batch / transaction like any other Bundle. when you post it to [base] then it will be processed

            See http://hl7.org/fhir/bundle.html#rest

            Source https://stackoverflow.com/questions/65113791

            QUESTION

            Querying copy status after export call - fhir azure
            Asked 2020-May-06 at 17:59

            Using the export api, i am able to export the data out to the container inside storage account.

            ...

            ANSWER

            Answered 2020-May-06 at 17:59

            As indicated in the spec (https://hl7.org/fhir/uv/bulkdata/export/index.html#bulk-data-status-request) you should store the Content-Location return header of the $export request. That is the location where you can check status of the export and see the URLs of the resulting files.

            Source https://stackoverflow.com/questions/61641646

            QUESTION

            Bulk Import Request for FHIR
            Asked 2020-Apr-29 at 16:39

            https://github.com/smart-on-fhir/bulk-import/blob/master/import.md

            I used above link for reference and tried to run import using the following code

            ...

            ANSWER

            Answered 2020-Apr-29 at 16:39

            $import is a draft spec and it is not supported (yet) on the Azure API for FHIR.

            Source https://stackoverflow.com/questions/61502121

            QUESTION

            Inserting multiple observation values in single resource - FHIR
            Asked 2020-Apr-28 at 16:11

            I have hourly information for the patients heart rate like this

            ...

            ANSWER

            Answered 2020-Apr-28 at 16:11

            For a single observation type and a single subject, if the observations are being made on a regular periodic basis, you can use the SampledData data type as the Observation.value. Typically that's for things like EKGs, fetal heart rate monitors, etc. which are sampling on a frequent basis, but nothing stops you from having a sampling period of an hour. However, if you don't have regular sampling, you must capture each as a distinct Observation. The reason is that we need to be able to extract the data however the user chooses to query it. The data needs to come in with the same sort of fine-grained organization that it might later need to go out. You might look at the Bulk Data API which uses LD-JSON to allow more efficient processing of large volumes of data.

            Source https://stackoverflow.com/questions/61484200

            QUESTION

            Copy Azure API for FHIR data into datalake
            Asked 2020-Apr-23 at 02:47

            I have configured Azure API for FHIR server and i am able to push some data into it. Using post man i am able to query the server and read the json files.

            Now, i would like to move on to the next step. Moving the data into datalake and then apply some machine learning model on it.

            First of all - Accessing the FHIR data in Microsoft Azure Storage explorer using the managed version - As per this comment, the data cannot be viewed in Cosmos DB when managed version is used.

            Now, i am really confused on where the FHIR-server data is stored. I have submitted few patient information and i am not really sure whether its stored in DB or not.

            I have couple of other questions in mind. To get the data out of FHIR server, should i first export it to cosmos Db and then setup a data factory to copy the data into datalake or is there any way, i can directly create a pipeline kind of stuff where data gets into datalake from fhir-serve itself.

            Can someone guide on this ?

            ...

            ANSWER

            Answered 2020-Apr-23 at 02:47

            This question seems to have considerable overlap with your other question. You would use $export to export the data from the FHIR API to some other form of storage, e.g. BLOB storage and then orchestrate whatever pipeline makes sense from there.

            Behind the managed FHIR API there is a database, of course, but there is no direct access to that data store in the managed service. If you want to look at the database schema, I would suggest having a look at the open source version of the service (https://github.com/Microsoft/fhir-server). However, I would recommend against taking any specific dependency on the schema as it may change.

            Source https://stackoverflow.com/questions/61364694

            QUESTION

            System Level Export Rest call for Azure API for FHIR
            Asked 2020-Apr-23 at 02:44

            I have setup Azure API for FHIR and a storage account. I successfully integrated the Storage account with FHIR by following this tutorial - https://docs.microsoft.com/en-us/azure/healthcare-apis/configure-export-data

            Followed by the integration process, i issues the following rest command

            ...

            ANSWER

            Answered 2020-Apr-23 at 02:44

            When you issue the $export request, the response should have a Content-Location header with a URL to the status document for the export job. If you check that location should should see a status of what has been exported and a location of the files.

            Source https://stackoverflow.com/questions/61366791

            QUESTION

            403 - Authorization Error - OAuth2.0 - Access Token - Azure Api For Fhir
            Asked 2020-Apr-20 at 16:56

            I have deployed and configured Azure API for FHIR using this link - https://docs.microsoft.com/en-gb/azure/healthcare-apis/tutorial-web-app-fhir-server

            Using postman i am able to successfully insert a patient information into fhir-server.

            To automate it I am using python and client service flow.

            ...

            ANSWER

            Answered 2020-Apr-20 at 16:56

            It looks like you have not added the (correct) object id of the registered application. Importantly, the application registration has an object id, but so does the service principal. It is the application id for the service principal you are looking for.

            Check instructions here:

            https://docs.microsoft.com/en-us/azure/healthcare-apis/find-identity-object-ids

            You can find it the service principal object id with PowerShell:

            Source https://stackoverflow.com/questions/61323003

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install fhir-server

            You can download it from GitHub.

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            gh repo clone mitre/fhir-server

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            git@github.com:mitre/fhir-server.git

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