package-analysis | Open Source Package Analysis | Code Analyzer library
kandi X-RAY | package-analysis Summary
kandi X-RAY | package-analysis Summary
This repo contains a few components to aid in the analysis of open source packages, in particular to look for malicious software. This code is designed to work with the Package Feeds project, and originally started there. The goal is for all of these components to work together and provide extensible, community-run infrastructure to study behavior of open source packages and to look for malicious software. We also hope that the components can be used independently, to provide package feeds or runtime behavior data for anyone interested.
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Top functions reviewed by kandi - BETA
- handleMessage processes a message
- Run runs a command and returns the result .
- listenLoop listens on the given topic .
- Parse parses the syscall file .
- messageLoop is the main loop of a message loop .
- listensure loop until the subscription is closed
- Load downloads BigQuery dataset
- podmanRunCmd returns an exec . Cmd for the given image
- Initalize initializes zap driver .
- parseCmdAndEnv parses command and environment and returns the command and environment .
package-analysis Key Features
package-analysis Examples and Code Snippets
Community Discussions
Trending Discussions on package-analysis
QUESTION
I am a newbie in using and making sense of ML methods and currently doing survival analysis using gbm
package in R.
I have difficulty understanding some of the output of the survival prediction model. I have checked this tutorial and this post but still, find trouble in making sense of the outputted survival prediction model.
Here is my code for analysis based on example data:
...ANSWER
Answered 2020-Oct-09 at 05:00Amer. Thx for your reading of my tutorial!
As you mentioned that "The output returned from the predict
function represents the f(x)
component of the hazard function ( h(t|x)=lambda(t)*exp(f(x))
)", maybe we need to understand the hazard function, i.e. h(t|x).
Before this, please sure that you have the basic knowledge of survival analysis. if not, it's recommended to read the great post. I think the post would help you solve the questions.
Back to your questions:
- Exactly, we can get the hazard ratios of log scale by invoking the
predict
function. Therefore, the hazard ratio can be calculated byexp()
. - Sure! Relying on the values of hazard ratio, we can divide the population into low-risk and high-risk groups. Alternatively, you can use the median of hazard ratios as the cutoff value. I think the cutoff value should be derived from the training set, and then test in the test set. If your model is effective, KM plots for low and high-risk groups would have a significant difference (measured by log-rank test statistically).
- Calibration curve plots are often used to evaluated the performance of model that outputs probabilities or likelihoods ranged from [0.0, 1.0]. We can calculate the survival function, and then specify a time point of interest, e.g. 5-Year. At last, we compare the survival probabilities with the actual survival state at the specified time, which is just the same as we do evaluating a binary classification model. More details of obtaining survival function can refer to my tutorial, and the principles can be found in that post aforementioned.
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