pdb-stats | Clickable PDB statistics : synchrotrons and MX software

 by   project-gemmi HTML Version: Current License: No License

kandi X-RAY | pdb-stats Summary

kandi X-RAY | pdb-stats Summary

pdb-stats is a HTML library. pdb-stats has no bugs, it has no vulnerabilities and it has low support. You can download it from GitHub.

These statistics serve as an example how to use gemmi-grep (one of the utilities provided by the project gemmi) to quickly extract data from mmCIF files. The data is extracted from a local copy of the PDB archive in mmCIF format (we rsync it once a week). We use gemmi-grep in the extract.sh script to extract all the needed metadata (and some more). Reading all the archive (34GB of compressed files) takes 20-30min. The output is redirected to a file (grep.out) that is later used to prepare JSON files used in our web pages.
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            kandi-support Support

              pdb-stats has a low active ecosystem.
              It has 5 star(s) with 0 fork(s). There are 2 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              pdb-stats has no issues reported. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of pdb-stats is current.

            kandi-Quality Quality

              pdb-stats has no bugs reported.

            kandi-Security Security

              pdb-stats has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              pdb-stats does not have a standard license declared.
              Check the repository for any license declaration and review the terms closely.
              OutlinedDot
              Without a license, all rights are reserved, and you cannot use the library in your applications.

            kandi-Reuse Reuse

              pdb-stats releases are not available. You will need to build from source code and install.
              Installation instructions are not available. Examples and code snippets are available.

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            pdb-stats Key Features

            No Key Features are available at this moment for pdb-stats.

            pdb-stats Examples and Code Snippets

            No Code Snippets are available at this moment for pdb-stats.

            Community Discussions

            No Community Discussions are available at this moment for pdb-stats.Refer to stack overflow page for discussions.

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install pdb-stats

            You can download it from GitHub.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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          • HTTPS

            https://github.com/project-gemmi/pdb-stats.git

          • CLI

            gh repo clone project-gemmi/pdb-stats

          • sshUrl

            git@github.com:project-gemmi/pdb-stats.git

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