ijl-utilities-wrappers | external software calls ( Cellpose , Elastix , Ilastix

by BIOP Java Version: ijl-utilities-wrappers-0.7.0 License: No License

X-Ray Key Features Code Snippets Community Discussions Vulnerabilities Install Support

kandi X-RAY | ijl-utilities-wrappers Summary

ijl-utilities-wrappers is a Java library. ijl-utilities-wrappers has no bugs, it has no vulnerabilities, it has build file available and it has low support. You can download it from GitHub.

Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)

Support

Quality

Security

License

Reuse

Support

ijl-utilities-wrappers has a low active ecosystem.

It has 19 star(s) with 6 fork(s). There are 6 watchers for this library.

It had no major release in the last 12 months.

There are 1 open issues and 14 have been closed. On average issues are closed in 102 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of ijl-utilities-wrappers is ijl-utilities-wrappers-0.7.0

Quality

ijl-utilities-wrappers has no bugs reported.

Security

ijl-utilities-wrappers has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

ijl-utilities-wrappers does not have a standard license declared.

Check the repository for any license declaration and review the terms closely.

Without a license, all rights are reserved, and you cannot use the library in your applications.

Reuse

ijl-utilities-wrappers releases are available to install and integrate.

Build file is available. You can build the component from source.

Installation instructions are available. Examples and code snippets are not available.

Top functions reviewed by kandi - BETA

kandi has reviewed ijl-utilities-wrappers and discovered the below as its top functions. This is intended to give you an instant insight into ijl-utilities-wrappers implemented functionality, and help decide if they suit your requirements.

Runs the program
Executes the command
Converts a roi array to a label image
Compute the RIRI
Convert an array of ris to an elis file
Get all control points
Save to zip file
Recursively collect a folder
Smoothes a roi
Convert float list to float array
Runs the registration algorithm
Creates a multi - channel registration
Main method for testing
Runs the cris
The main run method
Runs the importer task
Convert the elastix file to an array of coordinates
Converts a transformationix file into real points list
Smoothly smoothed by convex
Converts an RMI array of rois to an image file format
Convert a real point list to a Transform file
Convert an image to a roi array
Returns an array of RoiJ files
Converts an image into an EL file
Create the display panel
Creates roi for a shape

Get all kandi verified functions for this library.

ijl-utilities-wrappers Key Features

No Key Features are available at this moment for ijl-utilities-wrappers.

ijl-utilities-wrappers Examples and Code Snippets

No Code Snippets are available at this moment for ijl-utilities-wrappers.

Community Discussions

No Community Discussions are available at this moment for ijl-utilities-wrappers.Refer to stack overflow page for discussions.

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install ijl-utilities-wrappers

NOTE : if you rely on conda, the Cellpose wrapper requires to enable the conda command outside of conda prompt, cf installation instructions below : .
You can have a look to the StarDist installation, but for now it works from a branch of the project (@Scripts). Recommended way is to use yml file you can find below (or in /resources).

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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