FBAmodel | A flux balance analysis model for synechocystis

 by   FjolleJagt Java Version: Current License: No License

kandi X-RAY | FBAmodel Summary

kandi X-RAY | FBAmodel Summary

FBAmodel is a Java library. FBAmodel has no bugs, it has no vulnerabilities and it has low support. However FBAmodel build file is not available. You can download it from GitHub.

You can either copy the files in src/model in the place of the ones you already have, and run it normally, or run it with a command like the following:. [mess500:~/mas/Model]$ /usr/lib/jvm/java-7-openjdk/bin/java -Djava.library.path=/usr/local/lib/jni -Dfile.encoding=UTF-8 -classpath ~/mas/Model/bin:~/mas/Model/lib/glpk-java.jar:~/mas/Model/lib/jxl.jar model.mas. Note that the latest input file is "resources/in/divergence2.xls" (every time I made a change that changed the output of the model, I named that a new divergence - so divergence 1 was correcting the stochiometry, and divergence 2 was omitting some metabolites from the mass balance calculations).
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            kandi-support Support

              FBAmodel has a low active ecosystem.
              It has 0 star(s) with 0 fork(s). There are 1 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              FBAmodel has no issues reported. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of FBAmodel is current.

            kandi-Quality Quality

              FBAmodel has no bugs reported.

            kandi-Security Security

              FBAmodel has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              FBAmodel does not have a standard license declared.
              Check the repository for any license declaration and review the terms closely.
              OutlinedDot
              Without a license, all rights are reserved, and you cannot use the library in your applications.

            kandi-Reuse Reuse

              FBAmodel releases are not available. You will need to build from source code and install.
              FBAmodel has no build file. You will be need to create the build yourself to build the component from source.

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            FBAmodel Key Features

            No Key Features are available at this moment for FBAmodel.

            FBAmodel Examples and Code Snippets

            No Code Snippets are available at this moment for FBAmodel.

            Community Discussions

            No Community Discussions are available at this moment for FBAmodel.Refer to stack overflow page for discussions.

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install FBAmodel

            You can download it from GitHub.
            You can use FBAmodel like any standard Java library. Please include the the jar files in your classpath. You can also use any IDE and you can run and debug the FBAmodel component as you would do with any other Java program. Best practice is to use a build tool that supports dependency management such as Maven or Gradle. For Maven installation, please refer maven.apache.org. For Gradle installation, please refer gradle.org .

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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            CLONE
          • HTTPS

            https://github.com/FjolleJagt/FBAmodel.git

          • CLI

            gh repo clone FjolleJagt/FBAmodel

          • sshUrl

            git@github.com:FjolleJagt/FBAmodel.git

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