PathVisioRPC | RPC implementation of PathVisio that allows users

by PathVisio Java Version: v1.2.0 License: No License

X-Ray Key Features Code Snippets Community Discussions Vulnerabilities Install Support

kandi X-RAY | PathVisioRPC Summary

PathVisioRPC is a Java library. PathVisioRPC has no bugs, it has no vulnerabilities and it has low support. However PathVisioRPC build file is not available. You can download it from GitHub.

PathVisioRPC is now published!. Bohler, Anwesha, et al. “Automatically visualise and analyse data on pathways using PathVisioRPC from any programming environment.” BMC Bioinformatics 16 (2015): 267. PathVisioRPC is an XML-RPC implementation of PathVisio that allows users to create and edit biological pathways, visualize data on pathways, perform pathway statistics and exports results in various image formats. Since most major programming languages have a library/module providing XML-RPC functionality, this application enables users to access PathVisio functionality from their favourite analytical environment. Visit the project website for more information, including a lot of documentation on how to interact with the server in various programming languages:

Support

Quality

Security

License

Reuse

Support

PathVisioRPC has a low active ecosystem.

It has 6 star(s) with 3 fork(s). There are 6 watchers for this library.

It had no major release in the last 12 months.

There are 6 open issues and 3 have been closed. On average issues are closed in 24 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of PathVisioRPC is v1.2.0

Quality

PathVisioRPC has 0 bugs and 0 code smells.

Security

PathVisioRPC has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

PathVisioRPC code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

PathVisioRPC does not have a standard license declared.

Check the repository for any license declaration and review the terms closely.

Without a license, all rights are reserved, and you cannot use the library in your applications.

Reuse

PathVisioRPC releases are available to install and integrate.

PathVisioRPC has no build file. You will be need to create the build yourself to build the component from source.

Installation instructions, examples and code snippets are available.

PathVisioRPC saves you 832 person hours of effort in developing the same functionality from scratch.

It has 1909 lines of code, 115 functions and 14 files.

It has medium code complexity. Code complexity directly impacts maintainability of the code.

Top functions reviewed by kandi - BETA

kandi has reviewed PathVisioRPC and discovered the below as its top functions. This is intended to give you an instant insight into PathVisioRPC implemented functionality, and help decide if they suit your requirements.

Imports the given data file
Creates the PEX file
Load idmapper loader
Load an IDMapper from the database
Create and show the GUI
Shutdown the server
Adds a DataNode to the Path
Generates the HTML for the given path
Visualizes the data by evaluating a path in the graph
Visualizes the data
Adds a new line to the graph
Annotate the DataNode with the given URI
Runs the analysis of all pathways in the graph
Exports a path to the result directory
Exports a path from a Wikipath path
Annotate a data node in the graph
Adds an Interaction to the path
Exports a Wikipathways path to a PNG image
Visualizes the path and returns the results
Add a DataNode to the graph
Add a DataNode to the path
Create the visualization
Iterates over all edges and adds them to the graph
Removes an IDMapper from the database
Adds a line to the path
Export a list of Pathways in the graph

Get all kandi verified functions for this library.

PathVisioRPC Key Features

No Key Features are available at this moment for PathVisioRPC.

PathVisioRPC Examples and Code Snippets

No Code Snippets are available at this moment for PathVisioRPC.

Community Discussions

No Community Discussions are available at this moment for PathVisioRPC.Refer to stack overflow page for discussions.

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install PathVisioRPC

The build environment uses Ant and the compilation depends on libraries not available in this repository, but available from the PathVisio and HTMLExporter plugin repositories. The three default locations for additional libraries can be set:. The standalone target creates a Java Archive with all the dependencies included in the jar.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

Find more information at: