genome-coverage | many reads , computes and displays genome coverage

 by   alexandra-zaharia Java Version: Current License: GPL-3.0

kandi X-RAY | genome-coverage Summary

kandi X-RAY | genome-coverage Summary

genome-coverage is a Java library. genome-coverage has no bugs, it has no vulnerabilities, it has a Strong Copyleft License and it has low support. However genome-coverage build file is not available. You can download it from GitHub.

We start out with the input data:. The idea is to search for every exact occurrence of every read in every genome, and then compute and display genome coverage. Genome coverage refers to how many sequences "cover" every position in a given genome.
Support
    Quality
      Security
        License
          Reuse

            kandi-support Support

              genome-coverage has a low active ecosystem.
              It has 0 star(s) with 0 fork(s). There are 1 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              genome-coverage has no issues reported. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of genome-coverage is current.

            kandi-Quality Quality

              genome-coverage has no bugs reported.

            kandi-Security Security

              genome-coverage has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              genome-coverage is licensed under the GPL-3.0 License. This license is Strong Copyleft.
              Strong Copyleft licenses enforce sharing, and you can use them when creating open source projects.

            kandi-Reuse Reuse

              genome-coverage releases are not available. You will need to build from source code and install.
              genome-coverage has no build file. You will be need to create the build yourself to build the component from source.
              Installation instructions are not available. Examples and code snippets are available.

            Top functions reviewed by kandi - BETA

            kandi's functional review helps you automatically verify the functionalities of the libraries and avoid rework.
            Currently covering the most popular Java, JavaScript and Python libraries. See a Sample of genome-coverage
            Get all kandi verified functions for this library.

            genome-coverage Key Features

            No Key Features are available at this moment for genome-coverage.

            genome-coverage Examples and Code Snippets

            No Code Snippets are available at this moment for genome-coverage.

            Community Discussions

            No Community Discussions are available at this moment for genome-coverage.Refer to stack overflow page for discussions.

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install genome-coverage

            You can download it from GitHub.
            You can use genome-coverage like any standard Java library. Please include the the jar files in your classpath. You can also use any IDE and you can run and debug the genome-coverage component as you would do with any other Java program. Best practice is to use a build tool that supports dependency management such as Maven or Gradle. For Maven installation, please refer maven.apache.org. For Gradle installation, please refer gradle.org .

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
            Find more information at:

            Find, review, and download reusable Libraries, Code Snippets, Cloud APIs from over 650 million Knowledge Items

            Find more libraries
            CLONE
          • HTTPS

            https://github.com/alexandra-zaharia/genome-coverage.git

          • CLI

            gh repo clone alexandra-zaharia/genome-coverage

          • sshUrl

            git@github.com:alexandra-zaharia/genome-coverage.git

          • Stay Updated

            Subscribe to our newsletter for trending solutions and developer bootcamps

            Agree to Sign up and Terms & Conditions

            Share this Page

            share link

            Consider Popular Java Libraries

            CS-Notes

            by CyC2018

            JavaGuide

            by Snailclimb

            LeetCodeAnimation

            by MisterBooo

            spring-boot

            by spring-projects

            Try Top Libraries by alexandra-zaharia

            libgcds

            by alexandra-zahariaC

            ParticleSimulator

            by alexandra-zahariaC++

            Gal4Xy

            by alexandra-zahariaC

            Linux-IPC

            by alexandra-zahariaC++