rtree | memory R-tree and R * -tree implementations in Java

 by   davidmoten Java Version: 0.9 License: Apache-2.0

kandi X-RAY | rtree Summary

kandi X-RAY | rtree Summary

rtree is a Java library. rtree has no vulnerabilities, it has build file available, it has a Permissive License and it has medium support. However rtree has 10 bugs. You can download it from GitHub.

Immutable in-memory R-tree and R*-tree implementations in Java with reactive api

            kandi-support Support

              rtree has a medium active ecosystem.
              It has 959 star(s) with 196 fork(s). There are 60 watchers for this library.
              It had no major release in the last 12 months.
              There are 30 open issues and 48 have been closed. On average issues are closed in 49 days. There are 1 open pull requests and 0 closed requests.
              It has a neutral sentiment in the developer community.
              The latest version of rtree is 0.9

            kandi-Quality Quality

              rtree has 10 bugs (2 blocker, 0 critical, 5 major, 3 minor) and 468 code smells.

            kandi-Security Security

              rtree has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              rtree code analysis shows 0 unresolved vulnerabilities.
              There are 11 security hotspots that need review.

            kandi-License License

              rtree is licensed under the Apache-2.0 License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              rtree releases are available to install and integrate.
              Build file is available. You can build the component from source.
              Installation instructions are not available. Examples and code snippets are available.
              rtree saves you 4327 person hours of effort in developing the same functionality from scratch.
              It has 9171 lines of code, 1154 functions and 132 files.
              It has medium code complexity. Code complexity directly impacts maintainability of the code.

            Top functions reviewed by kandi - BETA

            kandi has reviewed rtree and discovered the below as its top functions. This is intended to give you an instant insight into rtree implemented functionality, and help decide if they suit your requirements.
            • Write a RTree to an output stream
            • Add a node
            • Create a vector for the children of the given data
            • Returns the bounds of the specified rectangle
            • Splits a list of items into two groups
            • Assign remaining areas
            • Find the best intersection of the two items
            • Returns the best candidate for the given list of points
            • Splits the specified list of nodes into a smaller list
            • Returns a comparator for the given sort type
            • Generates a list of pairs from a list of geometries
            • Compares two Point values
            • Appends this rectangle to this one
            • Creates a 32 - bit hash code
            • Creates a tree
            • Creates a node
            • Creates a context
            • Returns the geometry of this node
            • Compares two Point double
            • Add another rectangle to this one
            • Java io serializer
            • Returns a 32 bit hash code
            • Java io deserializer
            • Creates a subscriber for the given child
            • Reads binary data from an input stream
            • Adds the given number of elements to the current request
            Get all kandi verified functions for this library.

            rtree Key Features

            No Key Features are available at this moment for rtree.

            rtree Examples and Code Snippets

            No Code Snippets are available at this moment for rtree.

            Community Discussions


            Getting TypeError: argument of type 'CRS' is not iterable with OSMnx Package
            Asked 2021-May-13 at 04:04

            This question appears to have been answered before, but none of the answers helped in my case. First I should say that I've followed the OSMnx Installation steps exactly. Then tried to run the following code in a Jupyter Notebook:



            Answered 2021-May-13 at 04:04

            You have installed an extremely old version of OSMnx. Your conda list output shows you have version 0.7.3 installed, and that was released 3 or 4 years ago. It's so old that it's incompatible with the modern features of GeoPandas and pyproj, including the modern CRS object that's causing your error. I'm not clear how you did it! My best guess is you installed using one of the old tags on this page, which do point to version 0.7.3.

            This should be fixed by removing the old environment and then following the installation instructions here, like:

            Source https://stackoverflow.com/questions/67510332


            Updating packages in conda
            Asked 2021-Apr-14 at 20:26

            I have a problem with updating packages in conda. The list of my installed packages is:



            Answered 2021-Apr-14 at 20:26

            Channel pypi means that the package was installed with pip. You may need to upgrade it with pip as well

            Source https://stackoverflow.com/questions/67097308


            How to create a requirements.txt file in Django project?
            Asked 2021-Mar-18 at 01:12

            I have been trying to create a requirements.txt file from the Pycharm terminal but it is adding all unnecessary packages as well. What should I do to show only used packages? Thanks, requirements.txt:

            aiohttp==3.7.3 aioredis==1.3.1 alabaster==0.7.12 anaconda-client==1.7.2 anaconda-navigator==1.9.12 anaconda-project==0.8.3 appdirs==1.4.4 appnope==0.1.0 argh==0.26.2 asgiref==3.3.1 asn1crypto==1.3.0 astroid==2.4.2 astropy==4.0.1.post1 async-timeout==3.0.1 atomicwrites==1.4.0 attrs==19.1.0 autobahn==21.2.1 Automat==20.2.0 autopep8 @ file:///tmp/build/80754af9/autopep8_1592412889138/work Babel==2.8.0 backcall==0.1.0 backports.functools-lru-cache==1.6.1 backports.shutil-get-terminal-size==1.0.0 backports.tempfile==1.0 backports.weakref==1.0.post1 bcrypt==3.1.7 beautifulsoup4==4.9.1 bitarray @ file:///C:/ci/bitarray_1594751092677/work bkcharts==0.2 bleach==3.1.0 bokeh @ file:///C:/ci/bokeh_1593183652752/work boto==2.49.0 Bottleneck==1.3.2 brotlipy==0.7.0 bs4==0.0.1 certifi==2020.6.20 cffi==1.13.1 channels==3.0.3 channels-redis==3.2.0 chardet==3.0.4 cheroot==8.5.2 Click==7.0 cloudpickle @ file:///tmp/build/80754af9/cloudpickle_1594141588948/work clyent==1.2.2 colorama==0.4.4 comtypes==1.1.7 conda==4.8.3 conda-build==3.18.11 conda-package-handling==1.7.0 conda-verify==3.4.2 constantly==15.1.0 contextlib2==0.6.0.post1 cryptography==3.4.6 cycler==0.10.0 Cython @ file:///C:/ci/cython_1594830140812/work cytoolz==0.10.1 daphne==3.0.1 dask @ file:///tmp/build/80754af9/dask-core_1594156306305/work decorator==4.4.0 defusedxml==0.6.0 diff-match-patch @ file:///tmp/build/80754af9/diff-match-patch_1594828741838/work distlib==0.3.1 distributed @ file:///C:/ci/distributed_1594747837674/work dj-database-url==0.5.0 dj-rest-auth==2.1.3 Django==3.1.5 django-admin-honeypot==1.1.0 django-allauth==0.44.0 django-bootstrap4==0.0.5 django-channels==0.7.0 django-crispy-forms==1.11.0 django-defender==0.8.0 django-heroku==0.3.1 django-honeypot==0.9.0 django-tastypie==0.14.3 djangorestframework==3.12.2 dnspython==1.15.0 docutils==0.16 entrypoints==0.3 et-xmlfile==1.0.1 Faker==0.8.13 fastcache==1.1.0 filelock==3.0.12 flake8==3.7.8 Flask==0.12.4 Flask-Bcrypt==0.7.1 Flask-Cors==3.0.3 Flask-JWT-Extended==3.7.0 Flask-Login==0.4.0 fsspec==0.7.4 future==0.18.2 gevent @ file:///C:/ci/gevent_1593010772244/work glob2==0.7 gmpy2==2.0.8 greenlet==0.4.16 gunicorn==20.0.4 h5py==2.10.0 HeapDict==1.0.1 hiredis==1.1.0 html5lib @ file:///tmp/build/80754af9/html5lib_1593446221756/work hyperlink==21.0.0 idna @ file:///tmp/build/80754af9/idna_1593446292537/work imageio @ file:///tmp/build/80754af9/imageio_1594161405741/work imagesize==1.2.0 importlib-metadata==0.23 incremental==17.5.0 intervaltree @ file:///tmp/build/80754af9/intervaltree_1594361675072/work ipykernel==5.1.3 ipython==7.8.0 ipython-genutils==0.2.0 ipywidgets==7.5.1 isort==5.7.0 itsdangerous==1.1.0 jaraco.functools==3.1.0 jdcal==1.4.1 jedi==0.15.1 Jinja2==2.10.3 joblib @ file:///tmp/build/80754af9/joblib_1594236160679/work json5==0.9.5 jsonschema==3.1.1 jupyter==1.0.0 jupyter-client==5.3.1 jupyter-console==6.0.0 jupyter-core==4.4.0 jupyterlab==2.1.5 jupyterlab-server @ file:///tmp/build/80754af9/jupyterlab_server_1594164409481/work keyring @ file:///C:/ci/keyring_1593109210108/work kiwisolver==1.2.0 lazy-object-proxy==1.4.3 libarchive-c==2.9 llvmlite==0.32.1 locket==0.2.0 lxml @ file:///C:/ci/lxml_1594826940903/work MarkupSafe==1.1.1 matplotlib @ file:///C:/ci/matplotlib-base_1592844891112/work mccabe==0.6.1 menuinst==1.4.16 mistune==0.8.4 mkl-fft==1.1.0 mkl-random==1.1.1 mkl-service==2.3.0 mock==4.0.2 more-itertools==7.2.0 mpmath==1.1.0 msgpack==1.0.0 multidict==5.0.2 multipledispatch==0.6.0 navigator-updater==0.2.1 nbconvert==5.6.0 nbformat==4.4.0 networkx @ file:///tmp/build/80754af9/networkx_1594377231366/work nltk @ file:///tmp/build/80754af9/nltk_1592496090529/work node==0.9.25 nose==1.3.7 notebook==6.0.1 numba==0.49.1 numexpr==2.7.1 numpy==1.18.5 numpydoc @ file:///tmp/build/80754af9/numpydoc_1594166760263/work oauthlib==3.1.0 odict==1.7.0 olefile==0.46 openpyxl @ file:///tmp/build/80754af9/openpyxl_1594167385094/work packaging==20.4 pandas @ file:///C:/ci/pandas_1592841744841/work pandocfilters==1.4.2 paramiko==2.7.1 parso==0.5.1 partd==1.1.0 path==13.1.0 pathlib2==2.3.5 pathtools==0.1.2 patsy==0.5.1 pep8==1.7.1 pexpect==4.7.0 pickleshare==0.7.5 Pillow @ file:///C:/ci/pillow_1594304973959/work pipenv==2020.11.15 pkginfo== pluggy==0.6.0 plumber==1.6 ply==3.11 prometheus-client==0.7.1 prompt-toolkit==2.0.10 psutil==5.7.0 psycopg2==2.8.6 ptyprocess==0.6.0 py==1.8.0 pyasn1==0.4.8 pyasn1-modules==0.2.8 pycodestyle==2.5.0 pycosat==0.6.3 pycparser==2.19 pycurl== pydocstyle @ file:///tmp/build/80754af9/pydocstyle_1592848020240/work pyflakes==2.1.1 pygame==2.0.1 Pygments==2.4.2 PyHamcrest==2.0.2 PyJWT==1.7.1 pylint==2.6.0 pymongo==3.7.2 PyNaCl @ file:///C:/ci/pynacl_1595009196976/work pyodbc===4.0.0-unsupported pyOpenSSL @ file:///tmp/build/80754af9/pyopenssl_1594392929924/work pyparsing==2.4.7 PyQt5==5.15.2 PyQt5-sip==12.8.1 pyreadline==2.1 pyrsistent==0.15.4 PySocks==1.7.1 pytest==3.3.0 pytest-flask==0.11.0 python-dateutil==2.8.0 python-decouple==3.4 python-jsonrpc-server @ file:///tmp/build/80754af9/python-jsonrpc-server_1594397536060/work python-language-server @ file:///C:/ci/python-language-server_1594154480810/work python-mimeparse==1.6.0 python3-openid==3.2.0 pytz==2020.1 PyWavelets==1.1.1 pywin32==227 pywin32-ctypes==0.2.0 pywinpty==0.5.7 PyYAML==5.3.1 pyzmq @ file:///C:/Users/Rashidov/Desktop/mflix-python/pyzmq-22.0.3-cp38-cp38-win32.whl QDarkStyle==2.8.1 QtAwesome==0.7.2 qtconsole==4.5.5 QtPy==1.9.0 redis==3.5.3 regex @ file:///C:/ci/regex_1593435678736/work requests @ file:///tmp/build/80754af9/requests_1592841827918/work requests-oauthlib==1.3.0 rope==0.17.0 Rtree==0.9.4 ruamel-yaml==0.15.87 scikit-image==0.16.2 scikit-learn @ file:///C:/ci/scikit-learn_1592863447244/work scipy @ file:///C:/ci/scipy_1592916961137/work seaborn==0.10.1 selenium==3.141.0 Send2Trash==1.5.0 service-identity==18.1.0 simplegeneric==0.8.1 simplejson==3.17.2 singledispatch== sip==4.19.13 six==1.12.0 snowballstemmer==2.0.0 sortedcollections==1.2.1 sortedcontainers==2.2.2 soupsieve==2.0.1 Sphinx @ file:///tmp/build/80754af9/sphinx_1594223420021/work sphinxcontrib-applehelp==1.0.2 sphinxcontrib-devhelp==1.0.2 sphinxcontrib-htmlhelp==1.0.3 sphinxcontrib-jsmath==1.0.1 sphinxcontrib-qthelp==1.0.3 sphinxcontrib-serializinghtml==1.1.4 sphinxcontrib-websupport @ file:///tmp/build/80754af9/sphinxcontrib-websupport_1593446360927/work spyder @ file:///C:/ci/spyder_1594820234642/work spyder-kernels @ file:///C:/ci/spyder-kernels_1594744028846/work SQLAlchemy @ file:///C:/ci/sqlalchemy_1593446777599/work sqlparse==0.4.1 statsmodels==0.11.1 sympy @ file:///C:/ci/sympy_1594234724630/work tables==3.6.1 tblib==1.6.0 telepot==12.7 terminado==0.8.3 testpath==0.4.2 text-unidecode==1.2 textblob==0.15.3 threadpoolctl @ file:///tmp/tmp9twdgx9k/threadpoolctl-2.1.0-py3-none-any.whl toml==0.10.2 toolz==0.10.0 tornado==6.0.3 tqdm @ file:///tmp/build/80754af9/tqdm_1593446365756/work traitlets==4.3.3 Twisted @ file:///C:/Users/Rashidov/Desktop/chat_app/Twisted-20.3.0-cp38-cp38-win32.whl txaio==21.2.1 typing-extensions @ file:///tmp/build/80754af9/typing_extensions_1592847887441/work ujson==1.35 unicodecsv==0.14.1 urllib3==1.25.9 virtualenv==20.3.0 virtualenv-clone==0.5.4 watchdog @ file:///C:/ci/watchdog_1593447396356/work wcwidth==0.1.7 web.py==0.62 webencodings==0.5.1 Werkzeug==0.16.0 whitenoise==5.2.0 widgetsnbextension==3.5.1 win-inet-pton==1.1.0 win-unicode-console==0.5 wincertstore==0.2 wrapt==1.12.1 xlrd==1.2.0 XlsxWriter==1.2.9 xlwings==0.19.5 xlwt==1.3.0 xmltodict==0.12.0 yapf @ file:///tmp/build/80754af9/yapf_1593528177422/work yarl==1.6.3 zict==2.0.0 zipp==0.6.0 zope.component==4.6.2 zope.deferredimport==4.3.1 zope.deprecation==4.4.0 zope.event==4.4 zope.hookable==5.0.1 zope.interface==4.7.1 zope.lifecycleevent==4.3 zope.proxy==4.3.5



            Answered 2021-Mar-17 at 23:14

            Check out this Snakefood

            Especially the command sfood-imports which finds and lists import statements in python project

            So it is not depended on your env but rather on the code that you wrote

            Source https://stackoverflow.com/questions/66681708


            Overflow of div is expanding in y-direction, but need it in the x-direction with scroll
            Asked 2021-Feb-26 at 21:27

            Ok, so I'm making a project gallery with the template of an Image Gallery from W3Schools. I am making this from mobile-first, so sizes are best-matched for iPhone 5-ish.

            So I have made it, but the thumbnail container has the overflow expanding in the y-direction but I would like this container to expand into the x-direction and have it scrollable.

            Here is a jsfiddle: https://jsfiddle.net/6chv3kry/2/. Note this is quite incomplete, but the thumbnail should be visible with alt tags at the bottom of the page.

            I have tried changing to a flex display for the section-projects-thumbnail-row, but this does not work. Is it maybe due to the sizing, if so how can I change it so that it works...thank you!

            Here is the relevant code:




            Answered 2021-Feb-26 at 21:27

            You have 2 options.

            You have your 5 section-projects-thumbnail-col floating left with a width of 40% and the container with a width of 100% of the window. There's obviously no room enough.

            If you want to make it work that way you have to set your container: section-projects-thumbnail-row 200% width (40% * 5) and all your col will behave a you want asuming you use box-sizing: border-box; so paddings and margins do not take more room than 40%.

            Second option could be not using float, set your col to display:inline-blockand add to the container white-space: nowrap;. This would be a better option if the content is going to be dinamic so it will work with 5, 6 or as many elements you want.

            Good luck with your project.

            Source https://stackoverflow.com/questions/66392868


            Telegram bot on Heroku returns ModuleNotFoundError
            Asked 2021-Feb-25 at 18:00

            I've built this telegram bot yesterday, and it ran smoothly on Heroku.

            However, today I added a new package python-google-places and I attempted to push to Heroku but received the following errors in Heroku's log:



            Answered 2021-Feb-24 at 15:37

            Pipfile is redundant for Heroku. But it is ok to use it for development.

            Most probably that you are erasing it from dependencies using pipenv. Try to add to Pipfile and then do pip freeze

            Source https://stackoverflow.com/questions/66351049


            boost::geometry::index::rtree get intersection area of boxes from rtree::query
            Asked 2021-Feb-20 at 09:22

            I'm having boost::geometry::index::rtree of a boost::geometry::model::box. With rtree::query I'm getting all boxes that intersects with the set one. Now I need to calculate the intersection square for all the returned boxes. I can write the code that will do it, but probably in boost there is already something that do this job?



            Answered 2021-Feb-20 at 09:22


            Add a table within a ggplot facet
            Asked 2021-Feb-16 at 16:01

            I would need help in order to add something like a geom_table within my figure.

            Here is the figure I can produce :

            Here is the code I used :



            Answered 2021-Feb-16 at 16:01

            I wasn't familiar with the ggtree package or it's syntax but some trial and error shows that you can simply expand with geom_text and geom_bar to get a table-like facet.

            Source https://stackoverflow.com/questions/66226976


            Mixed data partitions in phylogeny reconstruction in R
            Asked 2021-Feb-04 at 15:59

            Let's have two matrices, one DNA sequence alignment and one consisting of binary characters.



            Answered 2021-Feb-04 at 15:59

            You are almost there, the following code should work:

            Source https://stackoverflow.com/questions/65993777


            Trouble installing turbodbc
            Asked 2021-Jan-11 at 20:49

            I am attempting to install turbodbc on my Ubuntu 20.10 machine.
            My specs are as follows: pip 20.2.4, Python 3.8.5 , gcc (Ubuntu 10.2.0-13ubuntu1) 10.2.0

            I have attempted the solutions provided in the previous posts here and and here.

            I am getting this error message



            Answered 2021-Jan-11 at 20:49

            Boost is not installed. You can try this

            Source https://stackoverflow.com/questions/65674126


            installing Brain Scaffold Builder with broken rtree dependency
            Asked 2021-Jan-04 at 18:39

            I have recently installed NEST on my MAC. I have to install the Brain Scaffold Builder. I followed the instructions and wrote bsb==3.6.0b6 and I received the following error message



            Answered 2021-Jan-04 at 18:39

            The rtree package did not come packaged with wheels before version 0.9.6 (see PR#163) and the BSB instead published it's own version of the wheels under the name rtree-linux as it only contained Linux wheels and later Windows wheels. Mac wheels had never been available up until PR#163 a month ago or so.

            You can resolve this issue by either cloning the repository and adapting setup.py to install rtree>=0.9.7 or by asking the maintainer (disclaimer: me) to do so; I have done so and you should be able to install the BSB with version 3.6.1 (pip install bsb) as of now on Mac without special efforts and it will use the rtree==0.9.7 Mac wheels.

            Source https://stackoverflow.com/questions/65560407

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network


            No vulnerabilities reported

            Install rtree

            You can download it from GitHub.
            You can use rtree like any standard Java library. Please include the the jar files in your classpath. You can also use any IDE and you can run and debug the rtree component as you would do with any other Java program. Best practice is to use a build tool that supports dependency management such as Maven or Gradle. For Maven installation, please refer maven.apache.org. For Gradle installation, please refer gradle.org .


            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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