pcollections | A Persistent Java Collections Library | Hashing library
kandi X-RAY | pcollections Summary
kandi X-RAY | pcollections Summary
PCollections serves as a [persistent] and immutable analogue of the Java Collections Framework. This includes efficient, thread-safe, generic, immutable, and persistent stacks, maps, vectors, sets, and bags, compatible with their Java Collections counterparts. Persistent and immutable datatypes are increasingly appreciated as a simple, design-friendly, concurrency-friendly, and sometimes more time- and space-efficient alternative to mutable datatypes.
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Top functions reviewed by kandi - BETA
- Initialize the base list
- Add an object array to a PMap
- Add a new random element
- Puts the given list of objects into the given map
- Benchmarks for not contains
- Fails if c contains n elements
- Iterator
- Iterate over a Collection
- Step 1
- Gets a list
- Test if this collection contains contains another collection
- Checks if the given object contains the given object
- Benchmarks the elements in a collection using a natural ordering
- Calculate a collection plus the elements in reverse order
- Benchmarks an ordered set with a random value
- A collection is added to a collection and a collection of objects
- Benchmarks a collection with a random number generator
- Adds a collection to a collection
- Add a new linked list
- Add elements to a collection
- Bench implementation for building a treeP vector
- Build a tree map with a random value
- Bench implementation for building a tree map
- Adding to the hash set
- Benchmark a collection with a random value
- Add a random value
pcollections Key Features
pcollections Examples and Code Snippets
import org.apache.beam.sdk.schemas.transforms.CoGroup;
import org.apache.beam.sdk.values.PCollectionTuple;
public class JoinExample {
public static void main(String[] args) {
final Pipeline pipeline = Pipeline.create(pipelineOpts)
PCollection> filenames = p.apply("Read files", FileIO.match().filepattern(input))
.apply(FileIO.readMatches())
.apply(ParDo.of(new DoFn>() {
@ProcessElement
public void process(ProcessContext c
Community Discussions
Trending Discussions on pcollections
QUESTION
In the apache beam documentation, it is mentioned that the watermarks for the pcollections are determined by the source. Considering pubsub as source, what is the logic that pubsub uses to derive the watermark. Any documentation around this to understand better.
...ANSWER
Answered 2021-May-06 at 10:18To define the watermark, we need to focus on the aspect of late data. "Refer the link for pubsub logic below."
What is the watermark heuristic for PubsubIO running on GCD?
QUESTION
After I do some processing and a group by key, I have a dataset like the one below. I now need to do some processing on each row of the data to get the output below. I have tried flatmap it is really slow because the length of the "value" list can be arbitrarily long. I figured I can split each row into separate pcollections, process in parallel and then flatten them together. How can I split each row into a different pcollection? If that isn't feasible, is there another way I can speed up computation?
Input
...ANSWER
Answered 2021-Mar-13 at 00:58When using the Apache Beam model, it is a common misconception that the parallelization scheme is defined by the PCollection (understandable since this is short for Parallel Collection). In actuality, the parallelization is defined per key in each PCollection[1]. In other words, the Beam model processes keys in parallel but values in a single key sequentially.
The problem you are coming up against is commonly referred to as a hot key. This happens when too many values are paired to a single key, thus limiting parallelism.
To manipulate the data to the expected output you will have to edit your existing pipeline to emit the values in such a way that not all elements go to a single key. This is a little tough because it looks like in your example you wish to output the index with the element. If this is the case, then no matter how you cut it, you will have to merge all the values somewhere to a key in memory to get the correct index.
If you don't care about getting the specific index like you have in the above example then take a look at the following code. This code assigns each element to a random partition within each key. This helps to break up the number of elements per key into something manageable.
QUESTION
I have PubSub topic having json raw message events, I want to filter good json record/events and bad json records/ events and store in different PCollections. For each bad record counter metrics should be increase and store logs in another PCollections so that later I can check the logs for bad json records. Which Apache beam transform i need to use and how to use those transform using Java.
...ANSWER
Answered 2021-Feb-19 at 21:31You can read the beam programming guide. You will find great solution and pattern for your use case. For example, to filter the good and the bad JSON, you need to create a transform with a standard output (let's say the correct JSON) and an addition output for the bad JSON.
So, from there, you have 2 PCollections. Then process them idependently. You can sink the bad JSON in a file, in BigQuery, or simply create a transform that write a special log trace in Cloud Logging to get and process this log trace later in another process if you want.
QUESTION
I am currently coding a streaming pipeline to insert data into Bigtable, but I have encountered a problem which I believe is a bug with Apache Beam, but would like some opinions. https://beam.apache.org/documentation/programming-guide/ In this documentation, it says that PCollections are immutable, but I have found a case where the PCollection is mutating unexpectedly due to a Pardo function at a branching point causing very unexpected errors, and also these errors occur randomly, not on all entries of data.
I have tested this both in deployment on Google Cloud Dataflow, in a jupyter notebook on Google Cloud and locally on my machine, and the error occurs on all platforms. Therefore, it should be related to the core library but I am not sure hence I am posting it here for people's wisdom.
So here is the code to recreate the problem:
...ANSWER
Answered 2021-Feb-13 at 23:21The statement on PCollection immutability is that DoFns SHOULD not mutate their inputs. In languages like Python where everything is passed by reference and by default mutable (no const
), this is difficult if not impossible to enforce.
QUESTION
I am trying to write Parquet files using dynamic destinations via the WriteToFiles
class.
I even found some further developed example like this one, where they build a custom Avro file sink.
I am currently trying to use the pyarrow
library to write a Parquet sink that could manage the write operation in a distributed way, similarly to how it is done by the WriteToParquet PTransform.
ANSWER
Answered 2021-Feb-04 at 10:15The parquet format is optimized for writing data in batches. Therefore it doesn't lend itself well to streaming, where you receive records one by one. In your example you're writing row by row in a parquet file, which is super unefficient.
I'd recommand saving your data in a format that lends itself well to appending data row by row, and then have a regular job that moves this data in batches to parquet files.
Or you can do like apache_beam.io.parquetio._ParquetSink
. It keeps records in memory in a buffer and write them in batch every now and then. But with this you run the risk of losing the records in the buffer if your application crashes.
QUESTION
I have a branching pipeline with multiple ParDo
transforms that are merged and written to text file records in a GCS bucket.
I am receiving the following messages after my pipeline crashes:
The worker lost contact with the service.
RuntimeError: FileNotFoundError: [Errno 2] Not found: gs://MYBUCKET/JOBNAME.00000-of-00001.avro [while running 'WriteToText/WriteToText/Write/WriteImpl/WriteBundles/WriteBundles']
Which looks like it can't find the log file it's been writing to. It seems to be fine until a certain point when the error occurs. I'd like to wrap a try:
/ except:
around it or a breakpoint, but I'm not even sure how to discover what the root cause is.
Is there a way to just write a single file? Or only open a file to write once? It's spamming thousands of output files into this bucket, which is something I'd like to eliminate and may be a factor.
...ANSWER
Answered 2020-Dec-02 at 03:42This question is linked to this previous question which contains more detail about the implementation. The solution there suggested to create an instance of google.cloud.storage.Client()
in the start_bundle()
of every call to a ParDo(DoFn)
. This is connected to the same gcs bucket - given via the args in WriteToText(known_args.output)
QUESTION
I'm trying to understand Apache Beam. I was following the programming guide and in one example, they say talk about The following code example joins the two PCollections with CoGroupByKey, followed by a ParDo to consume the result. Then, the code uses tags to look up and format data from each collection.
.
I was quite surprised, because I didn't saw at any point a ParDo
operation, so I started to wondering if the |
was actually the ParDo
. The code looks like this:
ANSWER
Answered 2020-Nov-21 at 15:29The |
represents a separation between steps, this is (using p
as Pbegin
): p | ReadFromText(..) | ParDo(..) | GroupByKey()
.
You can also reference other PCollections
before |
:
QUESTION
I'm new to Apache Beam and using the Python SDK. Let's say I have a PCollection with some elements that look like this:
...ANSWER
Answered 2020-Nov-02 at 10:07ParDo specifies a generic parallel processing and the runner will manage this "fanout", while Partition has no intention for a parallel but it is designed for spliting a collection into a sequence of sub-collections with the logic determined by a function which you create.
A typical user case for partition can be that of grouping students by percentile and passing groups to their corresponding downstream steps. Notice that different group of student can have different downstream process, and this is just not what ParDo is designed for.
In addition, another difference between Partition and ParDo is that the former must have a predefined partition number while the latter has no such concept.
QUESTION
I have a pipeline in Beam that uses CoGroupByKey
to combine 2 PCollections, first one reads from a Pub/Sub subscription and the second one uses the same PCollection, but enriches the data by looking up additional information from a table, using JdbcIO.readAll
. So there is no way there would be data in the second PCollection without it being there in the first one.
There is a fixed window of 10seconds with an event based trigger like below;
...ANSWER
Answered 2020-Sep-11 at 00:08You are using a non-deterministic triggering, which means the output is sensitive to the exact ordering in which events come in. Another way to look at this is that CoGBK does not wait for both sides to come in; the trigger starts ticking as soon as either side comes in.
For example, lets call your PCollections A and A' respectively, and assume they each have two elements a1, a2, a1', and a2' (of common provenance).
Suppose a1 and a1' come into the CoGBK, 39 seconds passes, and then a2 comes in (on the same key), another 2 seconds pass, then a2' comes in. The CoGBK will output ([a1, a2], [a1']) when the 40-second mark hits, and then when the window closes ([], [a2']) will get emitted. (Even if everything is on the same key, this could happen occasionally if there is more than a 40-second walltime delay going through the longer path, and will almost certainly happen for any late data (each side will fire separately).
Draining makes things worse, e.g. I think all processing time triggers fire immediately.
QUESTION
I am trying to perform a de-noramlization operation, where I need to reorganize a table with the following logic:
...ANSWER
Answered 2020-Aug-24 at 20:07Based on the resulting table you showed, I assume you want your output to look like this:
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Install pcollections
You can use pcollections like any standard Java library. Please include the the jar files in your classpath. You can also use any IDE and you can run and debug the pcollections component as you would do with any other Java program. Best practice is to use a build tool that supports dependency management such as Maven or Gradle. For Maven installation, please refer maven.apache.org. For Gradle installation, please refer gradle.org .
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