SDFEater | Always hungry SDF chemical file format parser

by lszeremeta Java Version: beta License: MIT

X-Ray Key Features Code Snippets Community Discussions Vulnerabilities Install Support

kandi X-RAY | SDFEater Summary

SDFEater is a Java library. SDFEater has no bugs, it has no vulnerabilities, it has build file available, it has a Permissive License and it has low support. You can download it from GitHub.

SDF parser written in Java is run from the command-line interface (CLI). You don't need to have new Java installed! Java 8 and above are supported. Do you love️ Docker? You can use a lightweight SDFEater container! SDFEater not only ~~eats~~ parses your SDF files, but also can add additional data to the output. The choice of output formats is really wide.

Support

Quality

Security

License

Reuse

Support

SDFEater has a low active ecosystem.

It has 7 star(s) with 4 fork(s). There are 2 watchers for this library.

There were 1 major release(s) in the last 12 months.

SDFEater has no issues reported. There are 1 open pull requests and 0 closed requests.

It has a neutral sentiment in the developer community.

The latest version of SDFEater is beta

Quality

SDFEater has no bugs reported.

Security

SDFEater has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

SDFEater is licensed under the MIT License. This license is Permissive.

Permissive licenses have the least restrictions, and you can use them in most projects.

Reuse

SDFEater releases are available to install and integrate.

Build file is available. You can build the component from source.

Installation instructions, examples and code snippets are available.

Top functions reviewed by kandi - BETA

kandi has reviewed SDFEater and discovered the below as its top functions. This is intended to give you an instant insight into SDFEater implemented functionality, and help decide if they suit your requirements.

Main method for testing
Parses the given file and writes it into the program
Print the atoms and bonds and bonds
Prints the main molecule data
Print properties keys and values

Get all kandi verified functions for this library.

SDFEater Key Features

No Key Features are available at this moment for SDFEater.

SDFEater Examples and Code Snippets

No Code Snippets are available at this moment for SDFEater.

Community Discussions

No Community Discussions are available at this moment for SDFEater.Refer to stack overflow page for discussions.

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install SDFEater

Use SDFEater in 3 easy steps. In this example, we will use the ChEBI dataset and ready to use JAR file. You need Java 8+ installed. SDFEater is also available as a Docker image. In most scenarios, JAR file or the Docker image should be sufficient and convenient to run SDFEater, but you may want to build everything yourself. That's all. Now you have the RDFa file ready in the current directory. You can try other output formats and options as described below. You can also use SDFEater to convert DrugBank SDF files or prepare your own SDF input file with supported keys.
Download the ready-to-use JAR SDFEater-VERSION-jar-with-dependencies.jar file from project release asset.
Download ChEBI complete 3-star dataset file and unpack downloaded gz archive. ChEBI datasets are shared via FTP, so if your browser or operating system does not support FTP, you may need an additional program such as FileZilla.
Assuming the ChEBI_complete_3star.sdf file is in the current directory and the output format you're interested in is RDFa, the command will be as follows:

Support

Would you like to improve the SDFEater? Great! We are waiting for your help and suggestions. If you are new to open source contributions, read How to Contribute to Open Source.

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