wheat_nlr | Supplementary source code for The bread wheat

 by   steuernb Java Version: Current License: No License

kandi X-RAY | wheat_nlr Summary

kandi X-RAY | wheat_nlr Summary

wheat_nlr is a Java library. wheat_nlr has no bugs, it has no vulnerabilities and it has low support. However wheat_nlr build file is not available. You can download it from GitHub.

Supplementary source code for "The bread wheat intracellular immune receptor repertoire"
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            kandi-support Support

              wheat_nlr has a low active ecosystem.
              It has 1 star(s) with 0 fork(s). There are 1 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              wheat_nlr has no issues reported. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of wheat_nlr is current.

            kandi-Quality Quality

              wheat_nlr has no bugs reported.

            kandi-Security Security

              wheat_nlr has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              wheat_nlr does not have a standard license declared.
              Check the repository for any license declaration and review the terms closely.
              OutlinedDot
              Without a license, all rights are reserved, and you cannot use the library in your applications.

            kandi-Reuse Reuse

              wheat_nlr releases are not available. You will need to build from source code and install.
              wheat_nlr has no build file. You will be need to create the build yourself to build the component from source.

            Top functions reviewed by kandi - BETA

            kandi has reviewed wheat_nlr and discovered the below as its top functions. This is intended to give you an instant insight into wheat_nlr implemented functionality, and help decide if they suit your requirements.
            • Main entry point for analysis
            • Write IntonExon exon sequences for an ITI 2
            • Writes information about the motifs in the matrix
            • This method writes motif pairs between two terminals
            • Translates the FastaSequence to a protein sequence
            • Translates a triplet string to its corresponding BioSequence
            • Gets the transcribe sequence
            • Load the genetic code table
            • Main method for testing
            • Writes a S5 table of genes in the S5 database
            • Writes a H4 transcript table
            • Set the quality scores
            • Set the quality score
            • Writes the FASTA to the given writer
            • Writes fasta as Fasta file
            • Read the fastq file
            • Returns the number of non standard bases in the sequence
            • Compares two sequence numbers
            • Checks if the sequence is a DNA sequence
            • Trim the sequence
            • Writes the NLP residues to the HMM file
            • Reads a CSL - Parser Transcript
            • Main method
            • Write the exon exon for an ITOL file
            • Check if a gene is contained in the input file
            • Write the S6 table to stdout
            Get all kandi verified functions for this library.

            wheat_nlr Key Features

            No Key Features are available at this moment for wheat_nlr.

            wheat_nlr Examples and Code Snippets

            No Code Snippets are available at this moment for wheat_nlr.

            Community Discussions

            No Community Discussions are available at this moment for wheat_nlr.Refer to stack overflow page for discussions.

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install wheat_nlr

            You can download it from GitHub.
            You can use wheat_nlr like any standard Java library. Please include the the jar files in your classpath. You can also use any IDE and you can run and debug the wheat_nlr component as you would do with any other Java program. Best practice is to use a build tool that supports dependency management such as Maven or Gradle. For Maven installation, please refer maven.apache.org. For Gradle installation, please refer gradle.org .

            Support

            BioSequence.java, BioSequenceReader.java and FastaReader.java are support classes that are used by methods in source code above.
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            CLONE
          • HTTPS

            https://github.com/steuernb/wheat_nlr.git

          • CLI

            gh repo clone steuernb/wheat_nlr

          • sshUrl

            git@github.com:steuernb/wheat_nlr.git

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