bio-tutorial | BioPython/scikit-bio tutorial for EuroSciPy

 by   jvkersch Jupyter Notebook Version: Current License: No License

kandi X-RAY | bio-tutorial Summary

kandi X-RAY | bio-tutorial Summary

bio-tutorial is a Jupyter Notebook library. bio-tutorial has no bugs, it has no vulnerabilities and it has low support. You can download it from GitHub.

Welcome to the BioPython/scikit-bio tutorial for EuroSciPy 2018 (Trento, Italy)! Here you’ll find setup instructions, the tutorial materials, and much more. The material is geared towards people with a beginner-to-intermediate Python background (if you can write a for-loop, a function, know what lists/dictionaries/…​ are, you should be fine). You don’t need a background in bio-informatics (in fact, I don’t have one): we will develop the required concepts as needed. If you have any questions, are getting stuck somewhere, or if you find any errors, please [open an issue] If you are at the conference, don’t hesitate to ask me directly. Suggestions for future topics are very welcome, as is any help with the dev-opsy part of things. In particular, the tutorial was not tested on Windows. Note that the tutorial is Python 3.
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              bio-tutorial has a low active ecosystem.
              It has 11 star(s) with 2 fork(s). There are 1 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              bio-tutorial has no issues reported. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of bio-tutorial is current.

            kandi-Quality Quality

              bio-tutorial has 0 bugs and 0 code smells.

            kandi-Security Security

              bio-tutorial has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              bio-tutorial code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              bio-tutorial does not have a standard license declared.
              Check the repository for any license declaration and review the terms closely.
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              Without a license, all rights are reserved, and you cannot use the library in your applications.

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              bio-tutorial releases are not available. You will need to build from source code and install.
              Installation instructions, examples and code snippets are available.

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            bio-tutorial Key Features

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            bio-tutorial Examples and Code Snippets

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            Community Discussions

            No Community Discussions are available at this moment for bio-tutorial.Refer to stack overflow page for discussions.

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            Vulnerabilities

            No vulnerabilities reported

            Install bio-tutorial

            The tutorial is presented as a series of Jupyter notebooks that explore various pieces of BioPython and scikit-bio. The bulk of the material requires only those 3 packages, so if you have a Python 3 environment with Jupyter/BioPython/scikit-bio, you can use that. Some of the visualization apps require additional packages, those are detailed below. If you use either EDM or Conda, you can use a pre-packaged environment. Both package managers have most or all of the packages that you need.

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            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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            CLONE
          • HTTPS

            https://github.com/jvkersch/bio-tutorial.git

          • CLI

            gh repo clone jvkersch/bio-tutorial

          • sshUrl

            git@github.com:jvkersch/bio-tutorial.git

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