mondo | Mondo Disease Ontology | Data Manipulation library

 by   monarch-initiative Jupyter Notebook Version: v2023-06-01 License: CC-BY-4.0

kandi X-RAY | mondo Summary

kandi X-RAY | mondo Summary

mondo is a Jupyter Notebook library typically used in Utilities, Data Manipulation applications. mondo has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. You can download it from GitHub.

This is the repository for managing the Mondo Disease Ontology (Mondo). Mondo aims to harmonizes disease definitions across the world. For more details on this ontology see:.
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              mondo has a low active ecosystem.
              It has 174 star(s) with 39 fork(s). There are 9 watchers for this library.
              There were 1 major release(s) in the last 12 months.
              There are 213 open issues and 2535 have been closed. On average issues are closed in 50 days. There are 16 open pull requests and 0 closed requests.
              It has a neutral sentiment in the developer community.
              The latest version of mondo is v2023-06-01

            kandi-Quality Quality

              mondo has 0 bugs and 0 code smells.

            kandi-Security Security

              mondo has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              mondo code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              mondo is licensed under the CC-BY-4.0 License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              mondo releases are available to install and integrate.
              It has 10324 lines of code, 15 functions and 13 files.
              It has low code complexity. Code complexity directly impacts maintainability of the code.

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            mondo Key Features

            No Key Features are available at this moment for mondo.

            mondo Examples and Code Snippets

            No Code Snippets are available at this moment for mondo.

            Community Discussions

            QUESTION

            How to split a single line of code into multiple lines in Go
            Asked 2022-Jan-11 at 07:16

            Is there any way to split a single, really long, line of code into multiple lines. But it would still be treated as a single line of code by compiler.

            For example in C++ or in Python, there's \ which let's us split the same line into multiple lines.
            C++ example code:

            ...

            ANSWER

            Answered 2022-Jan-10 at 17:41

            QUESTION

            Return a value inside a CompletableFuture in another CompletableFuture and return that future
            Asked 2021-Dec-28 at 10:45

            I want to get a value inside a CompletableFuture (in this case clonedWorld) in another CompletableFuture and return that future. This is my code, and I'm stuck here:

            ...

            ANSWER

            Answered 2021-Dec-28 at 10:45

            Your problem is that whenComplete() only takes a BiConsumer as parameter, which cannot handle the result of the returned CompletableFuture – except if an exception is thrown.

            The appropriate method to use if you want to change the result (here from something like Optional or an exception to just SlimeWorld or null) is handle(). The lambda passed to handle() should thus return the final result (the cloned world or null).

            And as CompletableFuture is a fluent API, you can just return the result of the handle() call from asyncCloneWorld():

            Source https://stackoverflow.com/questions/70498970

            QUESTION

            How to establish dependency between docker containers using dcoker-compose
            Asked 2021-Dec-15 at 14:37

            I am trying to run mongodb and Mongo-express containers using docker-compose. Mongo db might take some time to boot up(Up and running). So Mondo-express container should run only after Mondb container is up and running .

            Even though am using the "depends_on" tag in mongo-exp, still in a few occasions mongo-exp container building will fail. If I try to recreate the mongo-exp container, it will work.

            Please find the docker-compose.yaml

            ...

            ANSWER

            Answered 2021-Dec-15 at 12:11

            You can add a restart policy in case of failure to auto restart your mongo-exp container.

            Source https://stackoverflow.com/questions/70363043

            QUESTION

            How to Create an Array From JSON and Import the Values to Multiple Rows in a Google Sheet Using Google Apps Scripts
            Asked 2021-Dec-01 at 22:05

            I'm trying to import data from the Google Search Console API to a Google Sheet. I was able to retrieve the data I need in a JSON format but cannot figure out how to transfer it to the sheet so it fills multiple rows.

            I have the following function that is able to import the data, but only to one row:

            ...

            ANSWER

            Answered 2021-Dec-01 at 22:05

            The reason why your data was written on a single row is because you are pushing a list of elements in your array data, then you made your data array into 2-d when writing it in your sheet (Here is an example of what you are actually doing). Your array values should be in array[row][column] format when using setValues(), hence you should push an array to your data to make it a 2-d array.

            Sample Code:

            Source https://stackoverflow.com/questions/70187075

            QUESTION

            go does not write file from container unless application is manually started from container
            Asked 2021-Oct-26 at 21:45

            I've written a little golang application. It do two things:

            • handle http://localhost:5000
            • write a log each seconds

            This application is inside a docker container. The logger you can see is mine, is just an exercise. Application start. If I curl http://localhost:5000 I can see "Ciao, mondo!". But the logger does not starts. The strange thing is that if I go into the container, and I run the application by hand. The logger start to log. I thought this can be a problem of permissions.

            Here the docker-compose. ...

            ANSWER

            Answered 2021-Oct-26 at 21:45

            It's caused by running ListenAndServe before your goroutine. go forever() never execute, so it will not output any log file.

            The strange thing is that if I go into the container, and I run the application by hand. The logger start to log.

            I assume that You exec on running container, where one instance of your app is alredy running so the Port 5000 is alredy taken. You don't have any error handling, so it skips it and go to the forever() function. Empty select{} won't be needed, coz ListenAndServe will "block" the program: a nice explenation https://stackoverflow.com/a/44598343/14484111

            Source https://stackoverflow.com/questions/69730019

            QUESTION

            Sampling with row number in R
            Asked 2021-Oct-21 at 16:39

            Let's say I have a much bigger dataset than the one below:

            ...

            ANSWER

            Answered 2021-Oct-21 at 16:35

            Instead of sampling on the column, do the sample on the sequence of rows, thus it will return the row index which can be later used for subsetting the rows

            Source https://stackoverflow.com/questions/69665683

            QUESTION

            One to multiple merge two dataframes if one column string contained in another with Python
            Asked 2021-Sep-22 at 03:34

            I have two dataframes that I would like to merge based on if column value of words from df1 contains column value of keywords from df2. I've been trying to use str.extract. But no luck so far to get the expected result. Example below:

            df1:

            ...

            ANSWER

            Answered 2021-Sep-22 at 02:06

            Instead of extract you have to use findall and explode, example:

            Source https://stackoverflow.com/questions/69277298

            QUESTION

            VueJS 3 routing with vue-router and CDN
            Asked 2021-Sep-17 at 15:18

            For the past three hours or so, I have been trying to convert a VueJS 2 + vue-router + CDN project to VueJS 3. I haven't been able to make it work so far. The VueJS 2 version works just fine. The VueJS 3 version just won't work. I understand that sooner or later a project would need to be implemented with CLI, but I'd rather use CDN for the moment since I'm still experimenting.

            The error message I receive is: Uncaught ReferenceError: createRouter is not defined. I have received many others in my trials and tribulations.

            Here is the JS part (VueJS 2, works fine):

            ...

            ANSWER

            Answered 2021-Sep-17 at 15:18
                const app = Vue.createApp({
                    data() {
                        return {
                            mess: "ciao mondo"
                        }
                    }
                });
            
                const Home = { template: `Contenuto Home` };
                const About = { template: `Contenuto About` };
                const Portfolio = { template: `Contenuto Portfolio` };
                const Contatti = { template: `Contenuto Contatti` };
            
                const routes = [
                    { path: "/", component: Home },
                    { path: "/about", component: About },
                    { path: "/portfolio", component: Portfolio },
                    { path: "/contatti", component: Contatti }
                ];
            
                const router = VueRouter.createRouter({
                       history: VueRouter.createWebHashHistory(),
                       routes
                })
            
                app.use(router)
                app.mount('#app')
            

            Source https://stackoverflow.com/questions/69180702

            QUESTION

            MondoDB+C#+IQueryable - have an array of strings and how to join it to Mongo's collection in the Where clause
            Asked 2021-Jul-03 at 13:12

            Having quite a small experience with Mongo, please help... I have Employee collection (fields are: FirstName, LastName, Title, etc) in the Mondo DB, using C# MongoDB driver and using the collection as IQueryable so I can search for the data by using LINQ.

            I need to perform a complex search in Mongo's Employee collection. For example, a user enters SearchText="John Doe CEO", code split this string into an array: ["John", "Doe", "CEO"]. The task is: if any field (FirstName OR LastName OR Title) contains any word from the array, the query should return it as a result.

            AFAIR, this statement works fine when I query a simple List:

            ...

            ANSWER

            Answered 2021-Jul-03 at 13:12

            don't think it's possible to do with linq/asqueryable. you can do it with find, like so:

            Source https://stackoverflow.com/questions/68228582

            QUESTION

            Detect pattern matches within a corpus
            Asked 2021-Jun-14 at 09:26

            I would like to check if the text of a variable contains some geographical reference. I have created a dictionary with all the municipalities I'm interested in. My goal would be to have a dummy variable capturing whether the text of the variable includes any word included in the dictionary. Can you help me with that? I know it isprobably very easy but I'm struggling to do it.

            This is my MWE

            ...

            ANSWER

            Answered 2021-Jun-14 at 08:34

            You don't need to create your dictionary from the corpus - instead, create a single dictionary entry for your locality list, and look that up to generate a count of each locality. You can then count them by compiling the dfm, and then converting the feature of that dictionary key into a logical to get the vector you want.

            Source https://stackoverflow.com/questions/67921981

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install mondo

            You can download it from GitHub.

            Support

            Please use this GitHub repository's Issue tracker to request new terms/classes or report errors or specific concerns related to the ontology.
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            CLONE
          • HTTPS

            https://github.com/monarch-initiative/mondo.git

          • CLI

            gh repo clone monarch-initiative/mondo

          • sshUrl

            git@github.com:monarch-initiative/mondo.git

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