wiz | takes a metagenome-assembled-genome and does a lot of fancy | Build Tool library
kandi X-RAY | wiz Summary
kandi X-RAY | wiz Summary
takes a metagenome-assembled-genome and does a lot of fancy stuff with it
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Top functions reviewed by kandi - BETA
- Main function for wiz .
- Query ncbi assembly .
- Download phylogenetic assemblies .
- Create a directory .
- Initialize the Assembly .
- Create a summary for each assembly .
- Download url to output file .
wiz Key Features
wiz Examples and Code Snippets
Community Discussions
Trending Discussions on wiz
QUESTION
I'm reading someone else's code and I don't understand what is the use of @z
here:
ANSWER
Answered 2022-Feb-19 at 22:40@
refers to the matrix multiplication operator.
From the numpy
docs:
The @ operator can be used as a shorthand for np.matmul on ndarrays.
QUESTION
What does 'mu' stand for in uWSGI? I see that uWSGI pronounced "mu wiz gee"
. And WSGI means web-server gateway interface. But what about the 'mu' part?
ANSWER
Answered 2022-Feb-10 at 14:45It refers to the letter mu, μ
, which looks like u
if you squint. Since mu is the letter for the SI prefix micro-
, the idea is that uWSGI (or rather, μWSGI) would be a small WSGI.
However, the official documentation or repository for uWSGI don't use the letter mu, nor does the official logo, so I'd pronounce it "You Whiskey".
QUESTION
For this program, I'm trying to use Binary searching to find a specific element of a given array, such as title, year, or artist. For now, I'm only testing for title and year since they are both strings. But it seems that for some of the input I put in, the program would return -1, even though the input I put in exists on the array. I'm not sure why this happens.
First is the tester class, second code is the constructor class.
...ANSWER
Answered 2022-Feb-04 at 17:00for a binary search to work correctly it must be sorted in some way. If you're searching it by year you need to sort it from smallest to largest. if you're searching it by Title, those Titles must be in some alphabetical order, same with the Artist. Ex:
QUESTION
There are so many ways to define colour scales within ggplot2
. After just loading ggplot2
I count 22
functions beginging with scale_color_*
(or scale_colour_*
) and same number beginging with scale_fill_*
. Is it possible to briefly name the purpose of the functions below? Particularly I struggle with the differences of some of the functions and when to use them.
- scale_*_binned()
- scale_*_brewer()
- scale_*_continuous()
- scale_*_date()
- scale_*_datetime()
- scale_*_discrete()
- scale_*_distiller()
- scale_*_fermenter()
- scale_*_gradient()
- scale_*_gradient2()
- scale_*_gradientn()
- scale_*_grey()
- scale_*_hue()
- scale_*_identity()
- scale_*_manual()
- scale_*_ordinal()
- scale_*_steps()
- scale_*_steps2()
- scale_*_stepsn()
- scale_*_viridis_b()
- scale_*_viridis_c()
- scale_*_viridis_d()
What I tried
I've tried to make some research on the web but the more I read the more I get onfused. To drop some random example: "The default scale for continuous fill scales is scale_fill_continuous()
which in turn defaults to scale_fill_gradient()
". I do not get what the difference of both functions is. Again, this is just an example. Same is true for scale_color_binned()
and scale_color_discrete()
where I can not name the difference. And in case of scale_color_date()
and scale_color_datetime()
the destription says "scale_*_gradient
creates a two colour gradient (low-high), scale_*_gradient2
creates a diverging colour gradient (low-mid-high), scale_*_gradientn
creates a n-colour gradient." which is nice to know but how is this related to scale_color_date()
and scale_color_datetime()
? Looking for those functions on the web does not give me very informative sources either. Reading on this topic gets also chaotic because there are tons of color palettes in different packages which are sequential/ diverging/ qualitative plus one can set same color in different ways, i.e. by color name, rgb, number, hex code or palette name. In part this is not directly related to the question about the 2*22
functions but in some cases it is because providing a "wrong" palette results in an error (e.g. the error"Continuous value supplied to discrete scale
).
Why I ask this
I need to do many plots for my work and I am supposed to provide some function that returns all kind of plots. The plots are supposed to have similiar layout so that they fit well together. One aspect I need to consider here is that the colour scales of the plots go well together. See here for example, where so many different kind of plots have same colour scale. I was hoping I could use some general function which provides a colour palette to any data, regardless of whether the data is continuous or categorical, whether it is a fill or col easthetic. But since this is not how colour scales are defined in ggplot2
I need to understand what all those functions are good for.
ANSWER
Answered 2022-Feb-01 at 18:14This is a good question... and I would have hoped there would be a practical guide somewhere. One could question if SO would be a good place to ask this question, but regardless, here's my attempt to summarize the various scale_color_*()
and scale_fill_*()
functions built into ggplot2
. Here, we'll describe the range of functions using scale_color_*()
; however, the same general rules will apply for scale_fill_*()
functions.
There are 22 functions in all, but happily we can group them intelligently based on practical usage scenarios. There are three key criteria that can be used to define practically how to use each of the scale_color_*()
functions:
Nature of the mapping data. Is the data mapped to the color aesthetic discrete or continuous? CONTINUOUS data is something that can be explained via real numbers: time, temperature, lengths - these are all continuous because even if your observations are
1
and2
, there can exist something that would have a theoretical value of1.5
. DISCRETE data is just the opposite: you cannot express this data via real numbers. Take, for example, if your observations were:"Model A"
and"Model B"
. There is no obvious way to express something in-between those two. As such, you can only represent these as single colors or numbers.The Colorspace. The color palette used to draw onto the plot. By default,
ggplot2
uses (I believe) a color palette based on evenly-spaced hue values. There are other functions built into the library that use either Brewer palettes or Viridis colorspaces.The level of Specification. Generally, once you have defined if the scale function is continuous and in what colorspace, you have variation on the level of control or specification the user will need or can specify. A good example of this is the functions:
*_continuous()
,*_gradient()
,*_gradient2()
, and*_gradientn()
.
We can start off with continuous scales. These functions are all used when applied to observations that are continuous variables (see above). The functions here can further be defined if they are either binned or not binned. "Binning" is just a way of grouping ranges of a continuous variable to all be assigned to a particular color. You'll notice the effect of "binning" is to change the legend keys from a "colorbar" to a "steps" legend.
The continuous example (colorbar legend):
QUESTION
I'm newby and testing GoogleApps dropdown-menu on google main page. I need to get an element inside this menu one by one and assert it. So I've added new command in 'commands.js':
...ANSWER
Answered 2022-Jan-23 at 09:10I had tried a different approach.
First I have installed this: npm install cypress-iframe
and then wrote the code as below (Note the references
and import
made on top, which I think you can also add in a new file jsconfig.json
in the root folder as a one timer if you do not wish to keep importing these references on every page).
This worked for me.
QUESTION
I have created a website for desktop and mobile, and it has to be responsive. My problem is that when I resize the browser all the content gets zoomed out instead of adapting. I also have an issue with the HTML. why is it only taking up 1/3 of the page according to dev tools and when I add width:1100px
to my sections it renders the desktop version, but when I take it away it floats to the left side? Why is this happening?
Images of the problem:
...ANSWER
Answered 2022-Jan-15 at 19:43For making your website responsive you need to use media queries. It's like you tell the browser how to style your website in different sizes. I think your problem with your sections might also get solved if you try to make your website responsive.
QUESTION
I'm sorry for this very basic question, but I can't find it out. Basically I'm trying to read this file line-by-line, then in another HTML page whenever there is a string that match one of these lines, then it will be wrapped within the ...
tag. For the latter I can use the findAndReplaceDOMText library, and I thought that the former should be easy too. But I can only find answers to read an uploaded file. That is, using
ANSWER
Answered 2022-Jan-08 at 16:34You can use the Fetch API and read the response as text and iterate line by line
QUESTION
I'm trying to write a review for a place on google maps and give it 5 stars. I've done the comment part, but I can't click on the stars.
the part of code i wrote to send comment and give 5 stars:
...ANSWER
Answered 2022-Jan-03 at 03:05This means there is an overlapping element. Try closing the element or the below.
QUESTION
Hello i am using selenium webdriver for chrome in python and trying to scrape some data from https://www.google.com/travel/things-to-do
I am here focused on the place decscription which can be seen here:
So in order to get to each individual description I have to press on the attraction and save the html to list for future parsing with BeautifulSoup.
Every click refresh the page so i was thinking about couting somehow all the attractions that got displayed and then in loop click every attraction with saving the description.
Anybody has any idea how to approach it? Heres simple code that gets you to the place where i am stuck
...ANSWER
Answered 2021-Dec-26 at 22:25For each attraction index you can click it to open the details, get the details, close the details, get the list of attractions again and go for the next attraction.
Something like this should work:
QUESTION
I'm using selenium to automaticlly download several images from google images, cause all the other solutions previously made i found on internet were too slow or weren't working, but now i need the extract the source of the image, but when i try using element.get_attribute('src') it returns the base64 of the image,even tought when i search for the xpath on the chrome devtools the src attribute of the tag it's actually a url
Code trials:
...ANSWER
Answered 2021-Nov-05 at 08:59To print the value of the src attribute you need to induce WebDriverWait for the visibility_of_element_located()
and you can use either of the following Locator Strategies:
Using
CSS_SELECTOR
:
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Install wiz
You can use wiz like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.
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