CatHub | Python API for the Surface Reactions database | REST library

 by   SUNCAT-Center Python Version: 0.1.7 License: GPL-3.0

kandi X-RAY | CatHub Summary

kandi X-RAY | CatHub Summary

CatHub is a Python library typically used in Web Services, REST applications. CatHub has no bugs, it has no vulnerabilities, it has build file available, it has a Strong Copyleft License and it has low support. You can install using 'pip install CatHub' or download it from GitHub, PyPI.

CatHub provides an interface to the Surface Reactions database on Catalysis-Hub.org. The module includes a command line interface that can be used to access and upload data. A short guide is given below. We refer to the catalysis-hub documentation for details on how to submit data.
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            kandi-support Support

              CatHub has a low active ecosystem.
              It has 8 star(s) with 7 fork(s). There are 7 watchers for this library.
              OutlinedDot
              It had no major release in the last 12 months.
              There are 0 open issues and 1 have been closed. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of CatHub is 0.1.7

            kandi-Quality Quality

              CatHub has no bugs reported.

            kandi-Security Security

              CatHub has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              CatHub is licensed under the GPL-3.0 License. This license is Strong Copyleft.
              Strong Copyleft licenses enforce sharing, and you can use them when creating open source projects.

            kandi-Reuse Reuse

              CatHub releases are available to install and integrate.
              Deployable package is available in PyPI.
              Build file is available. You can build the component from source.
              Installation instructions are not available. Examples and code snippets are available.

            Top functions reviewed by kandi - BETA

            kandi has reviewed CatHub and discovered the below as its top functions. This is intended to give you an instant insight into CatHub implemented functionality, and help decide if they suit your requirements.
            • Use fuzzy match algorithm
            • Compare two atoms
            • Get a chemical formula
            • Returns the reduced chemical formula
            • Transfer atomic structures to the server
            • Perform fuzzy match on a list of structures
            • Update reaction
            • Read reaction data from table
            • Return the last ID of the last reaction
            • Create a template file for the given template
            • Transfer atomic structures to a file
            • Construct a reference system reference system
            • Show the data for a given pub_id
            • Get reactions
            • Plot intercepts and intercepts
            • Convert a db file into a pandas DataFrame
            • Write a reaction to the database
            • Delete a specific dataset
            • Create a new publication record
            • Return a table of publication results
            • Delete a publication
            • Set intermediate parameters
            • Get reactions from query
            • Preprocess a csv file
            • Get reaction reactions from folder
            • Check if a reaction exists on the surface
            • Get stoichiometry factors
            • Correct adiabatic correction
            Get all kandi verified functions for this library.

            CatHub Key Features

            No Key Features are available at this moment for CatHub.

            CatHub Examples and Code Snippets

            Examples
            Pythondot img1Lines of Code : 23dot img1License : Strong Copyleft (GPL-3.0)
            copy iconCopy
            from cathub.cathubsql import CathubSQL
            
            # To get data on catalysis-hub.org
            db = CathubSQL()
            
            # Data from local cathub .db file
            db = CathubSQL('filename.db')
            
            dataframe = db.get_dataframe(pub_id='PengRole2020',
                                         include_ato  
            Uploading data
            Pythondot img2Lines of Code : 5dot img2License : Strong Copyleft (GPL-3.0)
            copy iconCopy
            cathub organize  -a  -c  -x  -f  -S 
            
            cathub make_folders --create-template 
            cathub make_folders 
            
            cathub folder2db 
            
            cathub db2server 
              
            Using the cathub cli
            Pythondot img3Lines of Code : 2dot img3License : Strong Copyleft (GPL-3.0)
            copy iconCopy
            cathub --help
            
            cathub reactions --help
              

            Community Discussions

            QUESTION

            MongoDB Node.js TypeError: Cannot read property 'db' of null
            Asked 2019-Sep-16 at 14:58

            I'm making a DB for my project, but in this code:

            ...

            ANSWER

            Answered 2018-Jul-05 at 10:42

            As mentioned above, you need to log the connection error. Once you do this you'll have an idea what the connection problem is! Make sure also that the DB name is present in your URL!

            Source https://stackoverflow.com/questions/51188989

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install CatHub

            You can install using 'pip install CatHub' or download it from GitHub, PyPI.
            You can use CatHub like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
            Find more information at:

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            Install
          • PyPI

            pip install Cathub

          • CLONE
          • HTTPS

            https://github.com/SUNCAT-Center/CatHub.git

          • CLI

            gh repo clone SUNCAT-Center/CatHub

          • sshUrl

            git@github.com:SUNCAT-Center/CatHub.git

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