wavelets | Python implementation of the wavelet analysis | Dataset library
kandi X-RAY | wavelets Summary
kandi X-RAY | wavelets Summary
Python implementation of the wavelet analysis found in Torrence and Compo (1998)
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Top functions reviewed by kandi - BETA
- The first position of the signal
- Find the first value of the Fourier period
- The Fourier period of the wavelet
- The DC of the wavelet
- Compute the wavelet transform
- Global wavelet spectrum
- Calculate the mean of the coients
- Get the scaled scales
- Compute the optimal scale for the filter
- Set Fourier coefficients
- Scale from the wavelet
wavelets Key Features
wavelets Examples and Code Snippets
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Trending Discussions on wavelets
QUESTION
A whole host of actions keep returning to this problem:
pip install encodings
Fatal Python error: Py_Initialize: Unable to get the locale encoding
ModuleNotFoundError: No module named 'encodings'
python3
Fatal Python error: Py_Initialize: Unable to get the locale encoding
ModuleNotFoundError: No module named 'encodings'
libreoffice --safe-mode
Fatal Python error: Py_Initialize: Unable to get the locale encoding
ModuleNotFoundError: No module named 'encodings'
zypper se python |grep '^i '
ANSWER
Answered 2022-Mar-30 at 06:20Looking at the strace
output for both root
and greg
, the problem seems clear.
For the root
user, python 3.6 finds the libraries in /usr/lib64/python3.6
.
However, for greg
, it only looks under /usr/bin/python3
for subdirectories. That doesn't work because /usr/bin/python3
is a file.
I suspect that the user greg
has PYTOHNHOME
set erroneously to the location of the Python binary , and that is causing the issue.
Remove PYTOHNHOME
from your environment, log out and log in again.
Note: the stuff below is probably barking up the wrong tree. I'll leave it for information.
The encodings
module is an (undocumented) part of the python standard library. It is used by the locale
module.
Based on the output I suspect that your Python installation has been damaged or corrupted. Try re-installing python.
EDIT:
If a forced re-install doesn't fix the problem, check that the directory encodings
exist in your Python stdlib directory, and is accessible for all users.
To find out which directory that is:
QUESTION
Based on this paragraph of a paper about brain-computer-interface, I wanna extract time-frequency domain features using discrete wavelet transform and then calculate energy and entropy with the giving equation.
So I've chosen pywt in python, and now I have the below code for getting wavelet and entropy from each frequency band ( for example I'm using D2 ), and here is the link of data:
...ANSWER
Answered 2021-Oct-15 at 17:27Your problem is with negative numbers in second frequency band's result from wavelet transform. The logarithm of a negative number results in nan
using numpy
and a ValueError: math domain error
raised exception using python's math
library.
BTW I think you've made a mistake in implementing the formula. I think this is the correct implementation:
QUESTION
I am trying to create time-frequency representation of my brain signal. I would like to create the data for frequencies from 0hz - 120hz (so it can cover, delta, theta, alpha, beta, low-gamma and high-gamma frequency bands).
Here is my code:
First, I visualize my brain signal:
...ANSWER
Answered 2021-Jul-25 at 23:30Your widths
has to start from 1 not 0. Here's an illustration using random data.
QUESTION
I am controlling R trough Python by rpy2 package.
Everything works fine except when I have to introduce some function arguments throug a Rlist.
Rlists are defined by the same keyword than Python: list
; but its content it's very different.
Since Python believes I am creating a Python list, instead of a Rlist, an error is always shown.
I am using rpy2 to control WaveleComp R package.
Here I show an example in which I try to program legend_params
:
ANSWER
Answered 2020-Jun-21 at 12:36rpy2.rinterface.initr
is used to initialize the embedded R, and you will not need to worry about it if using the rpy2.robjects
interface.
ListVector
is an rpy2 class, only visible from the Python side:
https://rpy2.github.io/doc/v3.3.x/html/vector.html#rpy2.robjects.vectors.ListVector
The constructor for ListVector
works like this:
QUESTION
I am newbie in Signal Processing, I want find out the frequency rang each of level outputted by a Daubechies wavelet 'db4' transformation. The transformation is done with PyWavelets. I'm working in python and the code below outputs 5 detail levels and 1 approximation however I'm not sure which frequency range each level describes.
...ANSWER
Answered 2020-Mar-20 at 23:10Your question is trickier than it seems.
The short answer is: use pywt's scale2freq
built-in function to return the frequency associated with a given wavelet at a given scale. For instance, the code below returns the frequency of the Daubechies 4 wavelet, at scale 5 (0.14285714285714285):
import pywt
pywt.scale2frequency('db4',5)
You could get to the same result by computing the central frequency of your db4 wavelet (0.7142857142857143) and then dividing by the scale (5)
import pywt
pywt.central_frequency('db4')/5
Please note that this is not the actual central frequency of the signal! This quantity is called a pseudo-frequency because it is independent from the signal being analyzed.
In order to recover the central frequency of the signal, you need to divide the pseudo-frequency by the sampling rate of the signal:
import pywt
pywt.scale2frequency('db4',5)/dt
Where dt
is your sampling rate.
I hope this helps!
PS: I suggest plotting the spectrum of the reconstructed signal to convince yourself that the central frequency matches the value output by the aforementioned analytical formula.
QUESTION
I am studying Wavelets and making notes with octave, I wish I could have my own graphs that represent the annotated raw Wavelets, I saw that in MathLab has a function that plots the wavelets, just enter the name of the desired wavelet.
Is there any function in Octave (any of its packages) that does such a plot?
...ANSWER
Answered 2020-Jan-15 at 17:04There are a number of wavelet functions in the signal
package, that if you want to avoid compiling from source can be installed with pkg install -forge signal
or with apt-get install octave-signal
if you use Ubuntu. You can use it as follows:
QUESTION
I'm serializing some data and want to make the file size as small as possible without losing the essential details of the data. The first step for me was to save the data in a binary format instead of ASCII and I decided to try Flatbuffers. Previously when the data were stored as text files, they were about 400 mb. Using the schema shown below, the file is about 200 mb. So that's a nice decrease in size, but smaller would of course be better. The data consist of 1 of the ControlParams, 82 of the ControlData, and the intensity vector takes up most of the space, being a matrix with a size of about 128x5000. We are already around the theoretical binary size of 128x5000*82 * 4 bytes per float ~ 200 mb. The matrices are pretty dense in general, but here and there I can see rows that are zero. Can Flatbuffers take advantage of these zeros to reduce the file size further? Perhaps there are other inefficiencies that someone can spot in the schema, since I just am getting started with Flatbuffers?
Another way to go about reducing the file size might be investigating different wavelets to compress the original intensities with. I'm using the Haar transform now because I was able to make a C++ function to do this, and found that a compression of 2x or possibly 4x was possible. I might like to investigate other wavelets, but would like to know if others have tried different wavelets compared to Haar and found they were able to use fewer coefficients with them.
...ANSWER
Answered 2020-Jan-11 at 23:47Yes, your size is entirely determined by a single float
array, the rest of the FlatBuffer format is entirely irrelevant to the question of how to make this smaller.
And no, FlatBuffers doesn't do any form of automatic compression, since the design is all about random access. Any access to your float array should be O(1).
So optimizing this data comes entirely down to you. You say the data is matrices.. floats in matrices are often in limited ranges like -1 to 1, so could be quantized into a short
?
Other forms of compression of course mean you'd have to do your own packing/unpacking.
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