search | Search engine for the Cancer Gene Trust | Data Visualization library

 by   cancergenetrust Python Version: Current License: Apache-2.0

kandi X-RAY | search Summary

kandi X-RAY | search Summary

search is a Python library typically used in Analytics, Data Visualization applications. search has no bugs, it has no vulnerabilities, it has build file available, it has a Permissive License and it has low support. You can download it from GitHub.

Search engine for the Cancer Gene Trust based on Elastic Search.
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            kandi-support Support

              search has a low active ecosystem.
              It has 3 star(s) with 0 fork(s). There are no watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              search has no issues reported. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of search is current.

            kandi-Quality Quality

              search has 0 bugs and 0 code smells.

            kandi-Security Security

              search has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              search code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              search is licensed under the Apache-2.0 License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              search releases are not available. You will need to build from source code and install.
              Build file is available. You can build the component from source.
              It has 381 lines of code, 10 functions and 11 files.
              It has low code complexity. Code complexity directly impacts maintainability of the code.

            Top functions reviewed by kandi - BETA

            kandi has reviewed search and discovered the below as its top functions. This is intended to give you an instant insight into search implemented functionality, and help decide if they suit your requirements.
            • Index the steward
            • Add all submissions that are added to the tribe
            • Given a VCF file return a set of gene names
            • Find the steward for the given address
            Get all kandi verified functions for this library.

            search Key Features

            No Key Features are available at this moment for search.

            search Examples and Code Snippets

            No Code Snippets are available at this moment for search.

            Community Discussions

            QUESTION

            Error: MainActivity must extend android.app.Activity [Instantiatable]
            Asked 2022-Mar-31 at 02:13

            I tried upgrading Android Gradle Plugin from 4.2.2 to 7.0.1 using the upgrade assistant which is available in Android Studio at Tools > AGP Upgrade Assistant. The only change it made was to my project-level build.gradle file:

            ...

            ANSWER

            Answered 2021-Aug-24 at 16:35

            the Android Gradle Plugin documentation still says classpath 'com.android.tools.build:gradle:4.2.0' instead of 7.0.1.

            You need to read further down the page, to this and this. That table is only relevant for pre-7.0.0 versions.

            Is this a bug in Android Gradle Plugin 7.0.1?

            Quite possibly. Or, perhaps beyond, as the Instantiatable Lint check has a history of problems.

            If your scenario does not match one of those three August 2021 bugs, and you are in position to provide a reproducible test case, file a fresh issue! Beyond that, if a clean-and-rebuild is not clearing up your problem, you might need to simply disable the Instantiatable Lint check for the time being by adding the following to all of your build.gradle files at the application or library level (i.e. all except your project-level build.gradle):

            Source https://stackoverflow.com/questions/68899665

            QUESTION

            What is jsconfig.json
            Asked 2022-Mar-29 at 17:49

            If i search the same question on the internet, then i'll get only links to vscode website ans some blogs which implements it.

            I want to know that is jsconfig.json is specific to vscode or javascript/webpack?

            What will happen if we deploy the application on AWS / Heroku, etc. Do we have to make change?

            ...

            ANSWER

            Answered 2021-Aug-06 at 04:10

            This is definitely specific to VSCode.

            The presence of jsconfig.json file in a directory indicates that the directory is the root of a JavaScript Project. The jsconfig.json file specifies the root files and the options for the features provided by the JavaScript language service.

            Check more details here: https://code.visualstudio.com/docs/languages/jsconfig

            You don't need this file when deploy it on AWS/Heroku, basically, you can exclude this from your commit if you are using git repo, i.e., add jsconfig.json in your .gitignore, this will make your project IDE independent.

            Source https://stackoverflow.com/questions/68675994

            QUESTION

            npm notice Beginning October 4, 2021, all connections to the npm registry - including for package installation - must use TLS 1.2 or higher
            Asked 2022-Mar-22 at 09:17

            I am getting this warning from github on my npm project build process... I tried searching on the internet and also read the blog link posted by github - but I could not find the solution to it anywhere. Am I missing something ?

            Warning seen

            npm notice Beginning October 4, 2021, all connections to the npm registry - including for package installation - must use TLS 1.2 or higher. You are currently using plaintext http to connect. Please visit the GitHub blog for more information: https://github.blog/2021-08-23-npm-registry-deprecating-tls-1-0-tls-1-1/

            ...

            ANSWER

            Answered 2021-Sep-10 at 15:18

            Besides updating your version of node to an active or current LTS you want to ensure your NPM registry is set to an HTTPS endpoint:

            Source https://stackoverflow.com/questions/69044064

            QUESTION

            Error when trying to run my React Native app on Android
            Asked 2022-Mar-06 at 07:58

            I've built my React Native app and tested and troubleshooted with my iOS devices for months. Now I'm trying to built and test the app on Android for the first time. The thing is, that I keep getting errors trying to run the Android-version of my app. After hours of debugging and troubleshooting, I tried to create a new RN project and see if that could run on my emulator and device. I got that part working and then I wanted to copy/paste the files of my existing app project into the new project.

            I pasted my existing assets, styles, the source JS-files and the package.json file into the new project, ran npm install and then I ended up with the exact same error message as I had in the original project when I run react-native run-android.

            The full error message is here:

            ...

            ANSWER

            Answered 2021-Aug-21 at 13:43

            I've hit this same issue and have temporarily resolved it by uninstalling react-native-video (npm uninstall --save react-native-video). That's not a great answer as I need that component, but I don't have a full solution yet. I think somehow com.yqritc:android-scalablevideoview:1.0.4. is required by react-native-video but has gotten lost or removed. Other thoughts are welcome.

            UPDATE: Resolved! In your build.gradle in your Android folder you need to add the repository "jcenter()" in allprojects (not in build dependencies) like this...

            Source https://stackoverflow.com/questions/68835157

            QUESTION

            Under what notion of equality are typeclass laws written?
            Asked 2022-Feb-26 at 19:39

            Haskell typeclasses often come with laws; for instance, instances of Monoid are expected to observe that x <> mempty = mempty <> x = x.

            Typeclass laws are often written with single-equals (=) rather than double-equals (==). This suggests that the notion of equality used in typeclass laws is something other than that of Eq (which makes sense, since Eq is not a superclass of Monoid)

            Searching around, I was unable to find any authoritative statement on the meaning of = in typeclass laws. For instance:

            • The Haskell 2010 report does not even contain the word "law" in it
            • Speaking with other Haskell users, most people seem to believe that = usually means extensional equality or substitution but is fundamentally context-dependent. Nobody provided any authoritative source for this claim.
            • The Haskell wiki article on monad laws states that = is extensional, but, again, fails to provide a source, and I wasn't able to track down any way to contact the author of the relevant edit.

            The question, then: Is there any authoritative source on or standard for the semantics for = in typeclass laws? If so, what is it? Additionally, are there examples where the intended meaning of = is particularly exotic?

            (As a side note, treating = extensionally can get tricky. For instance, there is a Monoid (IO a) instance, but it's not really clear what extensional equality of IO values looks like.)

            ...

            ANSWER

            Answered 2022-Feb-24 at 22:30

            Typeclass laws are not part of the Haskell language, so they are not subject to the same kind of language-theoretic semantic analysis as the language itself.

            Instead, these laws are typically presented as an informal mathematical notation. Most presentations do not need a more detailed mathematical exposition, so they do not provide one.

            Source https://stackoverflow.com/questions/71258709

            QUESTION

            AttributeError: Can't get attribute 'new_block' on
            Asked 2022-Feb-25 at 13:18

            I was using pyspark on AWS EMR (4 r5.xlarge as 4 workers, each has one executor and 4 cores), and I got AttributeError: Can't get attribute 'new_block' on . Below is a snippet of the code that threw this error:

            ...

            ANSWER

            Answered 2021-Aug-26 at 14:53

            I had the same error using pandas 1.3.2 in the server while 1.2 in my client. Downgrading pandas to 1.2 solved the problem.

            Source https://stackoverflow.com/questions/68625748

            QUESTION

            android:exported needs to be explicitly specified for . Apps targeting Android 12 and higher are required to specify
            Asked 2022-Feb-23 at 14:13

            After upgrading to android 12, the application is not compiling. It shows

            "Manifest merger failed with multiple errors, see logs"

            Error showing in Merged manifest:

            Merging Errors: Error: android:exported needs to be explicitly specified for . Apps targeting Android 12 and higher are required to specify an explicit value for android:exported when the corresponding component has an intent filter defined. See https://developer.android.com/guide/topics/manifest/activity-element#exported for details. main manifest (this file)

            I have set all the activity with android:exported="false". But it is still showing this issue.

            My manifest file:

            ...

            ANSWER

            Answered 2021-Aug-04 at 09:18

            I'm not sure what you're using to code, but in order to set it in Android Studio, open the manifest of your project and under the "activity" section, put android:exported="true"(or false if that is what you prefer). I have attached an example.

            Source https://stackoverflow.com/questions/68554294

            QUESTION

            Could not resolve com.google.guava:guava:30.1-jre - Gradle project sync failed. Basic functionality will not work properly - in kotlin project
            Asked 2022-Feb-14 at 19:47

            It was a project that used to work well in the past, but after updating, the following errors appear.

            ...

            ANSWER

            Answered 2021-Sep-17 at 11:03

            Add mavenCentral() in Build Script

            Source https://stackoverflow.com/questions/69205327

            QUESTION

            Understanding color scales in ggplot2
            Asked 2022-Feb-03 at 17:47

            There are so many ways to define colour scales within ggplot2. After just loading ggplot2 I count 22 functions beginging with scale_color_* (or scale_colour_*) and same number beginging with scale_fill_*. Is it possible to briefly name the purpose of the functions below? Particularly I struggle with the differences of some of the functions and when to use them.

            • scale_*_binned()
            • scale_*_brewer()
            • scale_*_continuous()
            • scale_*_date()
            • scale_*_datetime()
            • scale_*_discrete()
            • scale_*_distiller()
            • scale_*_fermenter()
            • scale_*_gradient()
            • scale_*_gradient2()
            • scale_*_gradientn()
            • scale_*_grey()
            • scale_*_hue()
            • scale_*_identity()
            • scale_*_manual()
            • scale_*_ordinal()
            • scale_*_steps()
            • scale_*_steps2()
            • scale_*_stepsn()
            • scale_*_viridis_b()
            • scale_*_viridis_c()
            • scale_*_viridis_d()

            What I tried

            I've tried to make some research on the web but the more I read the more I get onfused. To drop some random example: "The default scale for continuous fill scales is scale_fill_continuous() which in turn defaults to scale_fill_gradient()". I do not get what the difference of both functions is. Again, this is just an example. Same is true for scale_color_binned() and scale_color_discrete() where I can not name the difference. And in case of scale_color_date() and scale_color_datetime() the destription says "scale_*_gradient creates a two colour gradient (low-high), scale_*_gradient2 creates a diverging colour gradient (low-mid-high), scale_*_gradientn creates a n-colour gradient." which is nice to know but how is this related to scale_color_date() and scale_color_datetime()? Looking for those functions on the web does not give me very informative sources either. Reading on this topic gets also chaotic because there are tons of color palettes in different packages which are sequential/ diverging/ qualitative plus one can set same color in different ways, i.e. by color name, rgb, number, hex code or palette name. In part this is not directly related to the question about the 2*22 functions but in some cases it is because providing a "wrong" palette results in an error (e.g. the error"Continuous value supplied to discrete scale).

            Why I ask this

            I need to do many plots for my work and I am supposed to provide some function that returns all kind of plots. The plots are supposed to have similiar layout so that they fit well together. One aspect I need to consider here is that the colour scales of the plots go well together. See here for example, where so many different kind of plots have same colour scale. I was hoping I could use some general function which provides a colour palette to any data, regardless of whether the data is continuous or categorical, whether it is a fill or col easthetic. But since this is not how colour scales are defined in ggplot2 I need to understand what all those functions are good for.

            ...

            ANSWER

            Answered 2022-Feb-01 at 18:14

            This is a good question... and I would have hoped there would be a practical guide somewhere. One could question if SO would be a good place to ask this question, but regardless, here's my attempt to summarize the various scale_color_*() and scale_fill_*() functions built into ggplot2. Here, we'll describe the range of functions using scale_color_*(); however, the same general rules will apply for scale_fill_*() functions.

            Overall Categorization

            There are 22 functions in all, but happily we can group them intelligently based on practical usage scenarios. There are three key criteria that can be used to define practically how to use each of the scale_color_*() functions:

            1. Nature of the mapping data. Is the data mapped to the color aesthetic discrete or continuous? CONTINUOUS data is something that can be explained via real numbers: time, temperature, lengths - these are all continuous because even if your observations are 1 and 2, there can exist something that would have a theoretical value of 1.5. DISCRETE data is just the opposite: you cannot express this data via real numbers. Take, for example, if your observations were: "Model A" and "Model B". There is no obvious way to express something in-between those two. As such, you can only represent these as single colors or numbers.

            2. The Colorspace. The color palette used to draw onto the plot. By default, ggplot2 uses (I believe) a color palette based on evenly-spaced hue values. There are other functions built into the library that use either Brewer palettes or Viridis colorspaces.

            3. The level of Specification. Generally, once you have defined if the scale function is continuous and in what colorspace, you have variation on the level of control or specification the user will need or can specify. A good example of this is the functions: *_continuous(), *_gradient(), *_gradient2(), and *_gradientn().

            Continuous Scales

            We can start off with continuous scales. These functions are all used when applied to observations that are continuous variables (see above). The functions here can further be defined if they are either binned or not binned. "Binning" is just a way of grouping ranges of a continuous variable to all be assigned to a particular color. You'll notice the effect of "binning" is to change the legend keys from a "colorbar" to a "steps" legend.

            The continuous example (colorbar legend):

            Source https://stackoverflow.com/questions/70942728

            QUESTION

            Android Studio [BumbleBee 2021.1.1] Emulator Timeout on Mac M1
            Asked 2022-Feb-02 at 09:11

            I have Android Studio BumbleBee 2021.1.1 downloaded, running on a MacBook Pro M1. When downloading Android Studio, I chose the Apple Chip option (opposed to Intel)

            I've created a Virtual Device - Android 12.0 arm64-v8a Pixel 4.

            When I attempt to run the emulator it gets stuck here

            Then, it times out:

            I have searched SO and other blogs and can only find outdated material based on a time in 2020/2021 when Android did not support ARM64. However, it's my understanding that this has now changed so https://github.com/google/android-emulator-m1-preview is no longer needed.

            What is the correct way to run the Android Emulator on a Mac with an M1 Chip?

            ...

            ANSWER

            Answered 2022-Jan-28 at 19:17

            I have found the issue so marking this as solved, however, if anyone knows why this solves the problem, please share!

            I found an issue opened on Google's anroid-emulator-m1-preview repo with this answer https://github.com/google/android-emulator-m1-preview/issues/76#issuecomment-1023563846

            Turns out, I just needed to uncheck 'Launch in a tool window' but again, not sure why that fixed the issue.

            Source https://stackoverflow.com/questions/70898219

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install search

            You can download it from GitHub.
            You can use search like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

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            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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            https://github.com/cancergenetrust/search.git

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            gh repo clone cancergenetrust/search

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            git@github.com:cancergenetrust/search.git

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