freqpattern | Frequent Pattern Mining | Data Mining library
kandi X-RAY | freqpattern Summary
kandi X-RAY | freqpattern Summary
Frequent Pattern Mining
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Top functions reviewed by kandi - BETA
- Perform FFP growth on the given data set
- Create a tree from data_set
- Mine the tree in - place
- Updates the tree with the given items
- Find pre - fix paths
- Recursively descend through the tree
- Update the node header
- Increase the count
- Perform apriori scan on data set
- Scans data_set with ck
- Generate a list of k - > k
- Convenience method for eclat
- Eclat algorithm
- Evaluate fp growth
- Calculates the FP growth tree
- Loads data from a BLP file
freqpattern Key Features
freqpattern Examples and Code Snippets
Community Discussions
Trending Discussions on freqpattern
QUESTION
Sorry in advance for the long, potentially wandering explanation. :)
The approach that I am taking, because I am specifically working with DNA sequencing, is to map each base to a number, create functions to map between the bases and the values that I assign to them, then create an array with a slot for each of the combinations of k bases (4^k), then use a for loop that essentially acts as a sliding window, incrementing the corresponding slot in the array for each k-length sequence. The algorithm then searches the array for the highest number and uses the index in the array to find the sequence(s) that are the most prevalent.
I am currently getting the following error:
...ANSWER
Answered 2021-Apr-06 at 00:19I think your problem can instead be boiled down to
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Install freqpattern
You can use freqpattern like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.
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