vedo | python module for scientific analysis | Data Visualization library

by marcomusy Python Version: 2024.5.2 License: MIT

X-Ray Key Features Code Snippets(2)Community Discussions(10)Vulnerabilities Install Support

kandi X-RAY | vedo Summary

vedo is a Python library typically used in Analytics, Data Visualization applications. vedo has no bugs, it has no vulnerabilities, it has build file available, it has a Permissive License and it has medium support. You can install using 'pip install vedo' or download it from GitHub, PyPI.

A lightweight and powerful python module for scientific analysis and visualization of 3d objects.

Support

Quality

Security

License

Reuse

Support

vedo has a medium active ecosystem.

It has 1632 star(s) with 235 fork(s). There are 28 watchers for this library.

There were 1 major release(s) in the last 6 months.

There are 86 open issues and 588 have been closed. On average issues are closed in 36 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of vedo is 2024.5.2

Quality

vedo has 0 bugs and 0 code smells.

Security

vedo has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

vedo code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

vedo is licensed under the MIT License. This license is Permissive.

Permissive licenses have the least restrictions, and you can use them in most projects.

Reuse

vedo releases are available to install and integrate.

Deployable package is available in PyPI.

Build file is available. You can build the component from source.

Installation instructions, examples and code snippets are available.

vedo saves you 12740 person hours of effort in developing the same functionality from scratch.

It has 53426 lines of code, 1009 functions and 383 files.

It has high code complexity. Code complexity directly impacts maintainability of the code.

Top functions reviewed by kandi - BETA

kandi has reviewed vedo and discovered the below as its top functions. This is intended to give you an instant insight into vedo implemented functionality, and help decide if they suit your requirements.

Plot axes
Create a box
Computes the visible bound of a list of actors
Returns the bounds of the bounding box
Plot a mesh
Show a plotter
Create a texture
Add a scalar bar chart
Add a scalar bar
The diagonal size of the bounding box
Add global axes
Plot ruler axes
Get notebook backend
Plot a scalar bar chart
Generate a histogram
Add a slider
Display a list of actors
Generate a skeleton of the analysis
Load a texture
Display labels
Write VTK object to vtk file
Fit a vector cloud to a point cloud
Plot a matrix
Add labels to the plot
Generate ticks for a given range of values
Export a window
Creates ruler axes
Generate a vignette
Set caption
Concatenate a mesh
Add a scalar bar plot

Get all kandi verified functions for this library.

vedo Key Features

No Key Features are available at this moment for vedo.

vedo Examples and Code Snippets

IBL Viewer,Examples

Python

Lines of Code : 19

License : Permissive (MIT)

Copy

from iblviewer.launcher import IBLViewer
viewer = IBLViewer()
viewer.launch()

from iblviewer.application import Viewer
viewer = Viewer()
viewer.initialize(embed_ui=True)
# Add some random point data
points = np.random.random((500, 3)) * 1000
viewer.

Citing bgheatmap

Python

Lines of Code : 1

License : Permissive (MIT)

Copy

Federico Claudi, & Luigi Petrucco. (2022). brainglobe/bg-heatmaps: (V0.2). Zenodo. https://doi.org/10.5281/zenodo.5891814

Community Discussions

Trending Discussions on vedo

Vedo Plotter in Qt - Mouse Click Event not registering at the correct position

How to compute boolean intersection between 3 geometries using vtk?

Vedo: Is there a way to add a camera to scenes and see images from perspective?

Warping a volumetric mesh using thin plates morphing in vedo

Python Plot 3D Histogram Hexagon

Adding image generated from another library as inset in matplotlib

Why I have problem with $(document).ready?

React Native: How to play video in FlatList

clean a badly-encoded text in Python

How to connect fragment and layout

QUESTION

Vedo Plotter in Qt - Mouse Click Event not registering at the correct position

Asked 2022-Apr-02 at 19:48

I have tried several different things about the mouse clicks not registering correctly in my Qt mainwindow. When using only my QHD monitor, the program worked just fine (video). However, when using my laptop (zoomed in at 1792 x 1120) as the only display, the mouse clicks seemed to have a varying up-right offset and register more accurately near the bottom left corner of the widget (video). I am suspicious that the screen resolution of the display might cause a problem for vedo.

The mouse event is a vedo plotter event. Changing the "screensize", "size", "pos" attributes of the plotter did not fix the issue.

I looked up some examples provided by vedo, specifically mousehover.py and qt_window1.py. The mousehover example worked fine on my laptop. However, adding a clicking event in qt_window1.py also created the same issue. Therefore, the problem most likely was caused by the qt widget.

...

ANSWER

Answered 2022-Apr-02 at 19:19

This turns out to be an upstream bug in vtk, unrelated to vedo. After downgrading VTK to version 8.1.2 and Python to 3.7, the clicking issue disappeared when running the program on my laptop. Other people also encountered the same problem, and here is an error report on vtk’s website that describes how vtkPropPicker is now returning the wrong world coordinates.

Source https://stackoverflow.com/questions/71329877

QUESTION

How to compute boolean intersection between 3 geometries using vtk?

Asked 2021-Oct-27 at 18:49

I'm trying to compute the intersection between 3 geometries using VTK.

I've started with the BooleanOperationPolyDataFilter example and made minor tweaks such as:

Adding a third sphere:

...

ANSWER

Answered 2021-Sep-12 at 09:35

You might just be missing a call to Update() in the second step. The vtkBooleanOperationPolyDataFilter seems to be working fine, eg. (python):

Source https://stackoverflow.com/questions/69145014

QUESTION

Vedo: Is there a way to add a camera to scenes and see images from perspective?

Asked 2021-Oct-27 at 18:07

I'm using Vedo in Python to visualize some 3D scans of indoor locations.

I would like to, e.g., add a 'camera' at (0,0,0), look left 90 degrees (or where ever), and see the camera's output.

Can this be done with Vedo? If not, is there a different python programming framework where I can open .obj files and add a camera and view through it programmatically?

...

ANSWER

Answered 2021-Oct-27 at 18:07

You can plot the same object in an embedded renderer and control its behaviour via a simple callback function:

Source https://stackoverflow.com/questions/69713025

QUESTION

Warping a volumetric mesh using thin plates morphing in vedo

Asked 2021-Jul-12 at 10:17

I'm trying to use the thin plates morphing function from vedo to warp a volumetric mesh. But I have not been successful. I even tried using a surface mesh for debugging but that didn't work either. Below is the original example provided by vedo.

...

ANSWER

Answered 2021-Jul-12 at 10:17

There were two issues with my code. As expected, the problem was in the way the Sources and Targets were defined.

Both Sources and Targets had to be created using the .tolist() method.
The Targets array that was imported from a ( .mat ) file had to be reshaped with a Fortran-like index order using

Targets = (Targets.reshape((length,3), order='F'))
Targets = Targets.tolist()

Another point is that I had to use a reduced number of Sources and Targets
for x in range(0, len(Targets), 50):
targets.append(Targets[x])

The result can be found through this link.

Source https://stackoverflow.com/questions/68286705

QUESTION

Python Plot 3D Histogram Hexagon

Asked 2021-May-24 at 14:59

I'm testing a TOF camera from Broadcom. It has hexagonal pixels.

I wish to represent the histogram in 3D as in the utility of the constructor.

I tested the vedo library. But I can’t give the values in Z and reorder the cells and trace to the ground

...

ANSWER

Answered 2021-May-24 at 14:59

You can easily create it with e.g.

Source https://stackoverflow.com/questions/67669234

QUESTION

Adding image generated from another library as inset in matplotlib

Asked 2020-Dec-24 at 12:38

I've generated a network figure using vedo library and I'm trying to add this as an inset to a figure generated in matplotlib

...

ANSWER

Answered 2020-Dec-24 at 12:38

I am not familiar with vedo but the general procedure would be to create an inset_axis and plot the image with imshow. However, your code is using networkx which has matplotlib bindings and you can directly do this without vedo

EDIT: code edited for 3d plotting

Source https://stackoverflow.com/questions/65419072

QUESTION

Why I have problem with $(document).ready?

Asked 2020-Oct-08 at 20:06

I'm learning jQuery but I have a problem.

Here the code:

...

ANSWER

Answered 2020-Oct-08 at 20:05

The order of activities is:

A script element to load jQuery 3.4.1 is added to the DOM
A script element to load jQuery 3.5.1 is added to the DOM
The $ function is called, but $ is undefined, so the script terminates with an exception
jQuery 3.4.1 is loaded, adding $ to the environment
jQuery 3.5.1 is loaded, overwriting $

Use a regular

Source https://stackoverflow.com/questions/64269770

QUESTION

React Native: How to play video in FlatList

Asked 2020-Sep-07 at 11:16

I have been in this code for a while in trying to list my videos from local directory to my react native app. I have asked couple of questions as a newbie in this regards earlier as I started the project but did not get any answer. Somehow I managed to get to this point. I have been able to get my videos from my local directory but the issue am having now is that my videos are only showing grey thumbnails, and when I tap on any video it gives a ReferenceError: Can't find variable: videos

Below is my screenshot and my code. Please I need to correct the wrong things am doing on this code. Thanks in advance for your help.

...

ANSWER

Answered 2020-Sep-07 at 11:16

according to react-native-video docs: for file source in device storage, must write 'file://' begin of path

Example:

source={{ uri: 'file:///sdcard/Movies/sintel.mp4' }}

read document https://github.com/react-native-community/react-native-video#source

Source https://stackoverflow.com/questions/63112876

QUESTION

clean a badly-encoded text in Python

Asked 2020-May-16 at 11:52

I have some texts in a Pandas dataframe (in a specific column called text)

here an abstract (converted to list):

...

ANSWER

Answered 2020-May-16 at 11:52

def string_cleaner(rouge_text):
    return ("".join(rouge_text.strip()).encode('ascii', 'ignore').decode("utf-8"))

Source https://stackoverflow.com/questions/61835734

QUESTION

How to connect fragment and layout

Asked 2020-Mar-03 at 22:02

I'm trying to set on click method in my project but, I can't connect my layout to the given fragment. When you press the icon of Instagram it should open persons Instagram but it only crashes.

Fragment code:

...

ANSWER

Answered 2020-Mar-03 at 18:41

please try https://www.instagram.com/v/ you must change http with https

Source https://stackoverflow.com/questions/60513119

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install vedo

To install the latest dev version of vedo: pip install -U git+https://github.com/marcomusy/vedo.git. To install from the conda-forge channel: conda install -c conda-forge vedo. Sometimes an older version of VTK can yield better visualizations with transparent objects, to install it use: pip install vtk==8.1.2 (if available on your system). To use in jupyter notebooks use function vedo.embedWindow(), you may want to install k3d with: pip install k3d==2.7.4.
To install the latest dev version of vedo: pip install -U git+https://github.com/marcomusy/vedo.git
To install from the conda-forge channel: conda install -c conda-forge vedo
Sometimes an older version of VTK can yield better visualizations with transparent objects, to install it use: pip install vtk==8.1.2 (if available on your system).
To use in jupyter notebooks use function vedo.embedWindow(), you may want to install k3d with: pip install k3d==2.7.4

Support

The webpage of the library with documentation is available here. 📌 Need help? Have a question, or wish to ask for a missing feature?. Do not hesitate to open a issue.

Find more information at: