divergence | Information Theoretic Measures of Entropy and Divergence | Dataset library

 by   michaelnowotny Python Version: 0.4.2 License: MIT

kandi X-RAY | divergence Summary

kandi X-RAY | divergence Summary

divergence is a Python library typically used in Artificial Intelligence, Dataset applications. divergence has no bugs, it has no vulnerabilities, it has build file available, it has a Permissive License and it has low support. You can install using 'pip install divergence' or download it from GitHub, PyPI.

Divergence is a Python package to compute statistical measures of entropy and divergence from probability distributions and samples.
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              divergence has a low active ecosystem.
              It has 16 star(s) with 5 fork(s). There are 1 watchers for this library.
              OutlinedDot
              It had no major release in the last 12 months.
              divergence has no issues reported. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of divergence is 0.4.2

            kandi-Quality Quality

              divergence has no bugs reported.

            kandi-Security Security

              divergence has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              divergence is licensed under the MIT License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              divergence releases are not available. You will need to build from source code and install.
              Deployable package is available in PyPI.
              Build file is available. You can build the component from source.
              Installation instructions are not available. Examples and code snippets are available.

            Top functions reviewed by kandi - BETA

            kandi has reviewed divergence and discovered the below as its top functions. This is intended to give you an instant insight into divergence implemented functionality, and help decide if they suit your requirements.
            • Calculate the Shannon divergence between two samples
            • Compute the Jensen - Shannon divergence between two distributions
            • Calculate the Shannon Jensen - Shannon divergence between two samples
            • Return the Jensen - Shannon divergence between two distributions
            • Compute mutual information from samples
            • Calculate the mutual information from a set of samples
            • Calculate mutual information from a Gaussian distribution
            • Calculate the mutual information of a density function
            • Calculate the continuous conditional entropy
            • Select a log function based on base
            • Calculate the minimum and max and max value for a given value
            • Builds the distribution
            Get all kandi verified functions for this library.

            divergence Key Features

            No Key Features are available at this moment for divergence.

            divergence Examples and Code Snippets

            K between Dirichlet distributions .
            pythondot img1Lines of Code : 74dot img1License : Non-SPDX (Apache License 2.0)
            copy iconCopy
            def _kl_dirichlet_dirichlet(d1, d2, name=None):
              """Batchwise KL divergence KL(d1 || d2) with d1 and d2 Dirichlet.
            
              Args:
                d1: instance of a Dirichlet distribution object.
                d2: instance of a Dirichlet distribution object.
                name: (optional  
            Compute the KL divergence between two distributions .
            pythondot img2Lines of Code : 58dot img2License : Non-SPDX (Apache License 2.0)
            copy iconCopy
            def kl_divergence(distribution_a, distribution_b,
                              allow_nan_stats=True, name=None):
              """Get the KL-divergence KL(distribution_a || distribution_b).
            
              If there is no KL method registered specifically for `type(distribution_a)`
              an  
            Computes the GelU divergence .
            pythondot img3Lines of Code : 46dot img3License : Non-SPDX (Apache License 2.0)
            copy iconCopy
            def gelu(features, approximate=False, name=None):
              """Compute the Gaussian Error Linear Unit (GELU) activation function.
            
              Gaussian error linear unit (GELU) computes
              `x * P(X <= x)`, where `P(X) ~ N(0, 1)`.
              The (GELU) nonlinearity weights in  

            Community Discussions

            QUESTION

            Correctly compute the divergence of a vector field in python
            Asked 2021-Jun-15 at 15:26

            I am trying to compute the divergence of a vector field:

            ...

            ANSWER

            Answered 2021-Jun-15 at 15:26

            Let me 1. explain the reason behind this observation, and 2. how to fix it.

            Reason:

            One needs to be careful about how the data is oriented when computing the divergence (or the gradient in general), since it is important to compute the gradient along the correct axis to obtain a physically valid result.

            np.meshgrid can output the mesh in two ways, depending on how you set the index parameter

            Index "xy" : Here, for every y value, we sweep the x-values.

            Source https://stackoverflow.com/questions/67974193

            QUESTION

            Finding highs and lows between lower and upper limit on Stochastic
            Asked 2021-May-10 at 18:43

            I'm trying to create Stochastic Divergences and I don't really like the available open source scripts. The question is how do I obtain the highs and lows below 30 and above 70 lower and upper limits only? That way I could compare them to their price above and there we go with the divergences. I'm not really interested in what's between those limits because it's inaccurate. Most of the scripts are using fractals, but I want specifically the outer highs/lows. Could you please share your experience on how to find those?

            ...

            ANSWER

            Answered 2021-May-10 at 18:43

            Could use something like this:

            Source https://stackoverflow.com/questions/67473755

            QUESTION

            Sample maximum possible data points from distribution to new distribution
            Asked 2021-May-10 at 15:21

            Context

            Assume there is a distribution of three nominal classes over each calendar week from an elicitation, e.g. like this:

            ...

            ANSWER

            Answered 2021-May-10 at 15:21

            You can try calculate the maximal total count for each week, then multiply that with the desired distribution. The idea is

            1. Devide the Count by Desired Distribution to get the possible total
            2. Calculate the minimal possible total for each week with groupby
            3. Then multiply the possible totals with the Desired Distribution to get the sample numbers.

            In code:

            Source https://stackoverflow.com/questions/67473006

            QUESTION

            Gradient of a function in OpenCL
            Asked 2021-May-10 at 04:31

            I'm playing around a bit with OpenCL and I have a problem which can be simplified as follows. I'm sure this is a common problem but I cannot find many references or examples that would show me how this is usually done Suppose for example you have a function (writing in CStyle syntax)

            ...

            ANSWER

            Answered 2021-May-10 at 04:31

            If your gradient function only has 5 components, it does not make sense to parallelize it in a way that one thread does one component. As you mentioned, GPU parallelization does not work if the mathematical structure of each components is different (multiple instructionsmultiple data, MIMD).

            If you would need to compute the 5-dimensional gradient at 100k different coordinates however, then each thread would do all 5 components for each coordinate and parallelization would work efficiently.

            In the backpropagation example, you have one gradient function with thousands of dimensions. In this case you would indeed parallelize the gradient function itself such that one thread computes one component of the gradient. However in this case all gradient components have the same mathematical structure (with different weighting factors in global memory), so branching is not required. Each gradient component is the same equation with different numbers (single instruction multiple data, SIMD). GPUs are designed to only handle SIMD; this is also why they are so energy efficient (~30TFLOPs @ 300W) compared to CPUs (which can do MIMD, ~2-3TFLOPs @ 150W).

            Finally, note that backpropagation / neural nets are specifically designed to be SIMD. Not every new algorithm you come across can be parallelize in this manner.

            Coming back to your 5-dimensional gradient example: There are ways to make it SIMD-compatible without branching. Specifically bit-maskimg: You would compute 2 cosines (for componet 1 express the sine through cosine) and one exponent and add all the terms up with a factor in front of each. The terms that you don't need, you multiply by a factor 0. Lastly, the factors are functions of the component ID. However as mentioned above, this only makes sense if you have many thousands to millions of dimensions.

            Edit: here the SIMD-compatible version with bit masking:

            Source https://stackoverflow.com/questions/67459984

            QUESTION

            Why doesn't vim accept \? in substitute()?
            Asked 2021-Apr-29 at 01:34
            :echo substitute("15", "15\?", "replaced", "")
            15
            
            ...

            ANSWER

            Answered 2021-Apr-29 at 01:34

            QUESTION

            incorrect mass balance with 2D mesh network fipy
            Asked 2021-Apr-26 at 18:38

            I wish to represent a diffusion in a 2D network (diffusion coefficient dependent on the value of phi) and a set phi input rate in a specific cell (so not a BC on a face). This seems like a very simple scenario, however, I must be doing something wrong as I get very odd results when computing this example:

            ...

            ANSWER

            Answered 2021-Apr-26 at 18:38

            .updateOld() is a method, not a property (it needs parentheses).

            Source https://stackoverflow.com/questions/67268080

            QUESTION

            How to implement RSI Divergence in Python
            Asked 2021-Apr-22 at 06:20

            I was wondering is there any Python library that covers RSI-Divergence (difference between a fast and a slow RSI) or any guidence about how can I implement its algorithm in Python.

            Already asked question: Programmatically detect RSI divergence. One of the answer suggests quantconnect forum for the Python version but it does not cover anything.

            I was not able to find its mathematical formula but I was able to find the RSI-Divergence in pine-script, as below, but I was not able to convert it into Python since its not possible to debug pine-script using tradingview.

            ...

            ANSWER

            Answered 2021-Jan-17 at 04:08

            I found this on the next link: Back Testing RSI Divergence Strategy on FX

            The author of the post used the exponential moving average for RSI calculation, using this piece of code:

            Source https://stackoverflow.com/questions/65666858

            QUESTION

            Vectorized KL divergence calculation between all pairs of rows of a matrix
            Asked 2021-Apr-20 at 01:26

            I would like to find out the KL divergence between all pairs of rows of a matrix. To explain, let's assume there is a matrix V of shape N x K. Now I want to create a matrix L of dimension N x N, where each element L[i,j] = KL(V[i,:],V[j,:]). So far I have used the following scipy.stats.entropy to compute

            ...

            ANSWER

            Answered 2021-Apr-20 at 01:26

            Ok, after massaging the equation for KL divergence a bit the following equation should work too and of course, it's magnitudes faster,

            Source https://stackoverflow.com/questions/65856231

            QUESTION

            storing value of ImplicitSourceTerm
            Asked 2021-Apr-08 at 20:43

            I am working with fipy and I wish to simulate a flow with a free flux BC on some selected faces. Following other examples, I tried 2 different technics:

            ...

            ANSWER

            Answered 2021-Apr-08 at 20:43
            1. why are the values of phi and phi2 slightly different?

            phi and phi2 are different because eq2 doesn't converge as rapidly as eq1. This is because eq1 is more implicit than eq2. If you change the tolerance for the residual, e.g., res > 1e-10, you'll see the two solutions are in much closer agreement.

            1. how could I extract the outflow term for each cell (when a more complex grid will be used) while keeping 'ImplicitSourceTerm', which is more efficient?

            You can still evaluate the flux phi2 * extCoef * phi2.faceGrad, even when you use the ImplicitSourceTerm.

            In general, it's not easy to extract what each Term is doing physically (see issue #461). You can use the FIPY_DISPLAY_MATRIX environment variable to see how each Term contributes to the solution matrix, but this may or may not give you much physical intuition for what's going on.

            Source https://stackoverflow.com/questions/67009597

            QUESTION

            A JAX custom VJP function for multiple input variable does not work for NumPyro/HMC-NUTS
            Asked 2021-Apr-07 at 16:08

            I am trying to use a custom VJP (vector-Jacobian product) function as a model for a HMC-NUTS in numpyro. I was able to make a single variable function that works for HMC-NUTS as follows:

            ...

            ANSWER

            Answered 2021-Feb-11 at 03:08
            def model(x,y):
            sigma = numpyro.sample('sigma', dist.Exponential(1.))
            x0 = numpyro.sample('x0', dist.Uniform(-1.,1.))
            A = numpyro.sample('A', dist.Exponential(1.))
            hv=vmap(h,(0,None),0)
            mu=hv(x-x0,A)
            numpyro.sample('y', dist.Normal(mu, sigma), obs=y)
            

            Source https://stackoverflow.com/questions/65684271

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install divergence

            You can install using 'pip install divergence' or download it from GitHub, PyPI.
            You can use divergence like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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            Install
          • PyPI

            pip install divergence

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            https://github.com/michaelnowotny/divergence.git

          • CLI

            gh repo clone michaelnowotny/divergence

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            git@github.com:michaelnowotny/divergence.git

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