ofs | simple python-based abstraction library | Storage library
kandi X-RAY | ofs Summary
kandi X-RAY | ofs Summary
A simple python-based abstraction library for the various blob storage out there including s3, google storage and local disk.
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Top functions reviewed by kandi - BETA
- Close the archive
- Write the file
- Generate the file header
- Check that the file is properly written
- Put a file on a bucket
- Write the file to the given filename
- Read a line from the stream
- Read n bytes from the file
- Read n bytes from the stream
- Upload a file to a bucket
- Get object from bucket
- Upload a stream to a bucket
- Get metadata for a bucket
- Delete the metadata for the given keys
- Return the metadata associated with the given label
- Read a file from the archive
- Check if filename is a ZIP file
- Store a stream in a bucket
- Runs an experiment
- List all buckets
- Get the URL for a bucket and label
- Return the filename of the zip file
- Extract all members of the archive
- Returns the contents of the zip file
- Delete metadata keys from a bucket
- Update the metadata for a file
ofs Key Features
ofs Examples and Code Snippets
Community Discussions
Trending Discussions on ofs
QUESTION
I need to modify the below code to work on more than one column.
Counting the number of unique values based on two columns in bash
...ANSWER
Answered 2021-Jun-15 at 19:48Consider this awk
:
QUESTION
I am trying to add integers together from multiple rows while maintaining the data that comes before the number.
Here is my raw data:
...ANSWER
Answered 2021-Jun-11 at 15:38You may use this awk:
QUESTION
I'm working on a bash script to process various LDAP queries into pipe delimited files. Some of the results records do not include all attributes, and the data for each record does not retun in the same attribute order for each record. I've scripted to ensure all records have the 4 necessary attributes, and am now trying use awk to reorder the fields of the output records to all match an established order. Below is a sample set of records I'm looking to process with the first record representing the desired order/column heads.
...ANSWER
Answered 2021-Jun-11 at 13:32Instead of setting FS=": "
you can take advantage of awk's paragraph mode by setting RS= FS='\n'
to break a record on \n\n
and a field being a line. Then split that line on the :
Since awk arrays are unordered, you need to keep an order index. In this case, the order is determined by the order of the first record. That is easily changed to a different order by assigning such to order
instead of reading it from the first record.
Here is an example (perhaps not optimized...)
QUESTION
I am working on setting up git repositories on a windows server (2019), attempting to follow https://git-scm.com/book/en/v2/Git-on-the-Server-Setting-Up-the-Server. However, no matter what I do, git push comes up with fatal: ''/Users/testing/testrepo.git'' does not appear to be a git repository.
I ran:
git init
git add test.txt (test file, just contained test)
git commit -m "test"
git remote add origin testing@(removed):Users/testing/testrepo.git
git push origin master
After struggling with this for a while, I enabled logging for ssh and found this line on the server side log file:
7744 2021-06-09 03:58:37.691 debug1: Executing command: "c:\windows\system32\cmd.exe" /c "git-receive-pack '/Users/testing/testrepo.git'" with no pty
I tried manually running git-recieve-pack '/Users/testing/testrepo.git', and it came up with the same error. However, I then tried running git-receive-pack "/Users/testing/testrepo.git", and it gave
00bb0000000000000000000000000000000000000000 capabilities^{} report-status report-status-v2 delete-refs side-band-64k quiet atomic ofs-delta object-format=sha1 agent=git/2.32.0.windows.1
0000
The only difference was " instead of '. Is this something weird with windows server, or am I doing something wrong?
ANSWER
Answered 2021-Jun-11 at 13:10Turns out it was an issue with the ssh server I was using: https://github.com/PowerShell/Win32-OpenSSH/issues/752. One of the workarounds in the comments was to set the git receivepack and uploadpack commands to use powershell, but since I didn't want to change that for my global git config or have to do it for every repository I found a better solution. Following https://docs.microsoft.com/en-us/windows-server/administration/openssh/openssh_server_configuration, I added a key to HKLM:\SOFTWARE\OpenSSH: DefaultShell = "C:\windows\System32\WindowsPowerShell\v1.0\powershell.exe". Now ssh commands go to powershell by default on that server, which fixed the issue with git-receive-pack.
QUESTION
I'm new to Linux and programming. My problem is the following: I have a file listing 3 columns. I want to swap the first and the last column, print it to prompt AND to a new file in one line. So I swapped the columns and printed it to prompt OR to a file.
$ awk -F, ' { t = $1; $1 = $3; $3 = t; print; } ' OFS=, liste.csv
This is my base line to print it to prompt. But it seems impossible to print it to a new file in the same command line. Does anyone have the idea? Here are some examples that didn't work:
$ awk -F, ' { t = $1; $1 = $3; $3 = t; print; } ' OFS=, liste.csv | >liste2.csv
$ printf "$(sudo awk -F, ' { t = $1; $1 = $3; $3 = t; print; } ' OFS=, liste.csv > liste2.csv)"
$ cat $(sudo awk -F, ' { t = $1; $1 = $3; $3 = t; print; } ' OFS=, liste.csv > liste2.csv)
I think you catch the drift of what I ask. Thanks!
...ANSWER
Answered 2021-Jun-08 at 11:02print it to prompt AND to a new file in one line
This sound like task for tee. Assuming
QUESTION
I have a huge csv with this structure (sample):
...ANSWER
Answered 2021-May-30 at 23:57You can do this in the begin section of your script:
QUESTION
I have a data set (test-file.csv
) with tree columns:
ANSWER
Answered 2021-May-27 at 11:28With your shown samples please try following. Written and tested in GNU awk
.
QUESTION
I'm new in awk, and I'm trying to modify column 3 (with numeration about NR) if column 1 has the word HETATM.
My input file is:
...ANSWER
Answered 2021-May-26 at 21:14Using any sed:
QUESTION
I need to create a column that every time shows the value which was on 2020-05-15
in Audi
column and this is needed to be grouped by column kind
. As a result, the column should show for CUs only 169507, Fnds 49661 ...
I was trying to do it with dplyr
and using ungroup()
at the end, however, was not successful in that.
ANSWER
Answered 2021-May-26 at 13:51Using dplyr
:
QUESTION
I have this tab separated file:
...ANSWER
Answered 2021-May-19 at 17:40With your shown samples, please try following.
1st solution: In case you have multiple gene_name
values in single line then following may help.
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You can use ofs like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.
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