glymur | Python interface to OpenJPEG library for reading and writing JPEG 2000 images | Messaging library

by quintusdias Python Version: 0.13.2.post1 License: MIT

X-Ray Key Features Code Snippets(2)Community Discussions(1)Vulnerabilities Install Support

kandi X-RAY | glymur Summary

glymur is a Python library typically used in Messaging applications. glymur has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. However glymur build file is not available. You can install using 'pip install glymur' or download it from GitHub, PyPI.

glymur contains a Python interface to the OpenJPEG library which allows one to read and write JPEG 2000 files. glymur works on Python 3.7, 3.8, 3.9, and 3.10. Please read the docs,

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Quality

Security

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Support

glymur has a low active ecosystem.

It has 53 star(s) with 22 fork(s). There are 4 watchers for this library.

There were 6 major release(s) in the last 12 months.

There are 13 open issues and 579 have been closed. On average issues are closed in 11 days. There are 3 open pull requests and 0 closed requests.

It has a neutral sentiment in the developer community.

The latest version of glymur is 0.13.2.post1

Quality

glymur has 0 bugs and 0 code smells.

Security

glymur has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

glymur code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

glymur is licensed under the MIT License. This license is Permissive.

Permissive licenses have the least restrictions, and you can use them in most projects.

Reuse

glymur releases are not available. You will need to build from source code and install.

Deployable package is available in PyPI.

glymur has no build file. You will be need to create the build yourself to build the component from source.

glymur saves you 5062 person hours of effort in developing the same functionality from scratch.

It has 10648 lines of code, 878 functions and 34 files.

It has medium code complexity. Code complexity directly impacts maintainability of the code.

Top functions reviewed by kandi - BETA

kandi has reviewed glymur and discovered the below as its top functions. This is intended to give you an instant insight into glymur implemented functionality, and help decide if they suit your requirements.

Copy the image
Initialize the dataset .
Command line interface for tiff2jp .
Parse Z segment .
Print geotiff .
Read tile header .
Parse a superbox box .
Parse command line arguments .
Set an option .
Setup the first tile .

Get all kandi verified functions for this library.

glymur Key Features

No Key Features are available at this moment for glymur.

glymur Examples and Code Snippets

Python open jp2 medical images - Scipy, glymur

Python

Lines of Code : 15

License : Strong Copyleft (CC BY-SA 4.0)

Copy

$ time convert sekscir25.jp2 x.jpg
real    0m25.378s
user    0m24.832s
sys 0m0.544s

$ time convert sekscir25.jp2 -crop 100x100+0+0 x.png
real    0m19.887s
user    0m19.380s
sys 0m0.504s

$ t

Python open jp2 medical images - Scipy, glymur

Python

Lines of Code : 2

License : Strong Copyleft (CC BY-SA 4.0)

Copy

vips dzsave image.mrxs targetdirectoryname --depth one --tile-size 2048 --overlap 0

Community Discussions

Trending Discussions on glymur

Python open jp2 medical images - Scipy, glymur

QUESTION

Python open jp2 medical images - Scipy, glymur

Asked 2018-Apr-18 at 09:29

I am trying to read and tile a jp2 image file. The image is RGB 98176 x 80656 pixels (it is medical image data).

When trying to read the image with glymur I get this error:

...

ANSWER

Answered 2017-Apr-20 at 13:14

The standard thing for reading huge medical images is openslide, I'd try that first. I'm not sure it will read jp2 directly, but assuming this is from a slide scanner, perhaps you could save in one of the formats that openslide supports?

ImageMagick will load sections of large jp2 images via OpenJPEG, though it's not especially quick. I have a 10k x 10k jp2 image here, for example, and if I convert to JPG I see:

Source https://stackoverflow.com/questions/43489810

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install glymur

You can install using 'pip install glymur' or download it from GitHub, PyPI.
You can use glymur like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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