markerGeneProfile | Marker gene profile estimation method used in NeuroExpresso

by PavlidisLab R Version: Current License: No License

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kandi X-RAY | markerGeneProfile Summary

markerGeneProfile is a R library. markerGeneProfile has no bugs, it has no vulnerabilities and it has low support. You can download it from GitHub.

In this tutorial homologene database is used through homologene package. Note that the default version of this database is somewhat old which means some annotations may have been changed. The homologene package also includes an updated version of the homologene package to make sure you get all the correct matches. If we look at dopaminergic cell markers for instance we could have gotten an extra gene (SCN2A) if we used the updated version.

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markerGeneProfile has a low active ecosystem.

It has 10 star(s) with 2 fork(s). There are 5 watchers for this library.

It had no major release in the last 6 months.

There are 2 open issues and 4 have been closed. On average issues are closed in 52 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of markerGeneProfile is current.

Quality

markerGeneProfile has 0 bugs and 0 code smells.

Security

markerGeneProfile has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

markerGeneProfile code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

markerGeneProfile does not have a standard license declared.

Check the repository for any license declaration and review the terms closely.

Without a license, all rights are reserved, and you cannot use the library in your applications.

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markerGeneProfile releases are not available. You will need to build from source code and install.

Installation instructions, examples and code snippets are available.

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markerGeneProfile Key Features

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markerGeneProfile Examples and Code Snippets

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Vulnerabilities

No vulnerabilities reported

Install markerGeneProfile

Use devtools to install. Additional github packages needs to be installed for it work. In this document additional packages are used that are not package dependencies.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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