uwot | R package implementing the UMAP dimensionality reduction | Data Visualization library

 by   jlmelville R Version: v0.1.10 License: GPL-3.0

kandi X-RAY | uwot Summary

kandi X-RAY | uwot Summary

uwot is a R library typically used in Analytics, Data Visualization applications. uwot has no bugs, it has no vulnerabilities, it has a Strong Copyleft License and it has low support. You can download it from GitHub.

An R implementation of the Uniform Manifold Approximation and Projection (UMAP) method for dimensionality reduction (McInnes et al. 2018), that also implements the supervised and metric (out-of-sample) learning extensions to the basic method. Translated from the Python implementation.
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              uwot has a low active ecosystem.
              It has 239 star(s) with 27 fork(s). There are 21 watchers for this library.
              OutlinedDot
              It had no major release in the last 12 months.
              There are 25 open issues and 39 have been closed. On average issues are closed in 91 days. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of uwot is v0.1.10

            kandi-Quality Quality

              uwot has no bugs reported.

            kandi-Security Security

              uwot has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              uwot is licensed under the GPL-3.0 License. This license is Strong Copyleft.
              Strong Copyleft licenses enforce sharing, and you can use them when creating open source projects.

            kandi-Reuse Reuse

              uwot releases are available to install and integrate.
              Installation instructions are not available. Examples and code snippets are available.

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            uwot Key Features

            No Key Features are available at this moment for uwot.

            uwot Examples and Code Snippets

            No Code Snippets are available at this moment for uwot.

            Community Discussions

            QUESTION

            Trying to use a loop to plot and visualise each data frame stored in a list
            Asked 2020-Jun-25 at 06:46

            sorry if this is a rookie question and the long post. Thank you in advance. So I have a dataset of 88250 rows 131 columns, rows are observations and columns are labels and variables (column 1:21 are labels characters and 21:131 are variables doubles). I was trying to use UMAP from UWOT library to visualise and later perform supervised training. Now the first thing I tried to do is to tune the parameters for the UMAP model, namely n_neighbors and min_dist. UMAP output will be a table of X and Y coordinations and I can attach them onto my data frame then plot them. Here are the codes for one set of parameter chosen and I could plot a scatter plot and convert it to a 2D density plot to visualise differences in different treatments, hence the facet_wrap.

            ...

            ANSWER

            Answered 2020-Jun-25 at 06:46

            The answer to the original problem is in the comments. Replace para[[i]] with i.

            To add a title to the plot:

            One way would be to simultaneously map over para and the n_neighbors column of hyper_grid, and use that in the title. If I understand your code correctly, the following should work. Subsetting hyper_grid$n_neighbors with [1:40] may be unnecessary, if 40 is the total nrow of hyper_grid.

            Source https://stackoverflow.com/questions/62547290

            QUESTION

            How do I debug stuck rails process in development?
            Asked 2020-May-05 at 09:01

            I'm in the process of upgrading my old rails 4.2 app to rails 5. I'm currently trying to make it work at 5.1. When I try to access a page of my app in development, it seems to boot okay and it starts to render. By the browser never receives a response from the server and the server just stops outputting to the logs. I cannot figure out what is going on.

            How can I further debug what why it hangs and never responds?

            Output of rails s:

            ...

            ANSWER

            Answered 2020-May-05 at 09:01

            Check whether you are using the //= syntax to require files in your CoffeeScript files. Apparently that is not supported anymore in sprockets 4.

            You should replace all //= in .coffee files with #=

            Disclaimer: I'm working on the same project as OP :)

            Source https://stackoverflow.com/questions/61459467

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install uwot

            You can download it from GitHub.

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