uwot | R package implementing the UMAP dimensionality reduction | Data Visualization library
kandi X-RAY | uwot Summary
kandi X-RAY | uwot Summary
An R implementation of the Uniform Manifold Approximation and Projection (UMAP) method for dimensionality reduction (McInnes et al. 2018), that also implements the supervised and metric (out-of-sample) learning extensions to the basic method. Translated from the Python implementation.
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QUESTION
sorry if this is a rookie question and the long post. Thank you in advance. So I have a dataset of 88250 rows 131 columns, rows are observations and columns are labels and variables (column 1:21 are labels characters and 21:131 are variables doubles). I was trying to use UMAP from UWOT library to visualise and later perform supervised training. Now the first thing I tried to do is to tune the parameters for the UMAP model, namely n_neighbors and min_dist. UMAP output will be a table of X and Y coordinations and I can attach them onto my data frame then plot them. Here are the codes for one set of parameter chosen and I could plot a scatter plot and convert it to a 2D density plot to visualise differences in different treatments, hence the facet_wrap.
...ANSWER
Answered 2020-Jun-25 at 06:46The answer to the original problem is in the comments. Replace para[[i]]
with i
.
To add a title to the plot:
One way would be to simultaneously map over para and the n_neighbors column of hyper_grid, and use that in the title. If I understand your code correctly, the following should work. Subsetting hyper_grid$n_neighbors with [1:40] may be unnecessary, if 40 is the total nrow of hyper_grid.
QUESTION
I'm in the process of upgrading my old rails 4.2 app to rails 5. I'm currently trying to make it work at 5.1. When I try to access a page of my app in development, it seems to boot okay and it starts to render. By the browser never receives a response from the server and the server just stops outputting to the logs. I cannot figure out what is going on.
How can I further debug what why it hangs and never responds?
Output of rails s
:
ANSWER
Answered 2020-May-05 at 09:01Check whether you are using the //=
syntax to require files in your CoffeeScript files. Apparently that is not supported anymore in sprockets 4.
You should replace all //=
in .coffee files with #=
Disclaimer: I'm working on the same project as OP :)
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