EpiEstim | A tool to estimate time varying instantaneous reproduction | Data Visualization library

by mrc-ide R Version: 2.2-3 License: No License

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kandi X-RAY | EpiEstim Summary

EpiEstim is a R library typically used in Analytics, Data Visualization, Pytorch applications. EpiEstim has no bugs, it has no vulnerabilities and it has low support. You can download it from GitHub.

A tool to estimate time varying instantaneous reproduction number during epidemics. It is described in the following paper:. @article{Cori2013, author={Cori, A and Ferguson, NM and Fraser, C and Cauchemez, S}, year={2013}, title={{A New Framework and Software to Estimate Time-Varying Reproduction Numbers During Epidemics}}, journal={Am. J. Epidemiol.}, doi={10.1093/aje/kwt133}, }. Anne Cori, Neil M. Ferguson, Christophe Fraser, Simon Cauchemez, A New Framework and Software to Estimate Time-Varying Reproduction Numbers During Epidemics, American Journal of Epidemiology, Volume 178, Issue 9, 1 November 2013, Pages 1505–1512.

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EpiEstim has a low active ecosystem.

It has 68 star(s) with 28 fork(s). There are 17 watchers for this library.

It had no major release in the last 12 months.

There are 33 open issues and 50 have been closed. On average issues are closed in 102 days. There are 1 open pull requests and 0 closed requests.

It has a neutral sentiment in the developer community.

The latest version of EpiEstim is 2.2-3

Quality

EpiEstim has no bugs reported.

Security

EpiEstim has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

EpiEstim does not have a standard license declared.

Check the repository for any license declaration and review the terms closely.

Without a license, all rights are reserved, and you cannot use the library in your applications.

Reuse

EpiEstim releases are available to install and integrate.

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EpiEstim Key Features

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EpiEstim Examples and Code Snippets

No Code Snippets are available at this moment for EpiEstim.

Community Discussions

Trending Discussions on EpiEstim

Error while using "EpiEstim" and "ggplot2" libraries

QUESTION

Error while using "EpiEstim" and "ggplot2" libraries

Asked 2020-Aug-06 at 10:13

First of all, I must say I'm completely noob in R. So I apologize in advance for asking for help with such a simple task. My task is to form a graph of COVID-19 cases for a certain period using data from the CSV file. Unfortunately, at the moment I cannot contact the person from the World Health Organization who provided the data and the script for launching. But I was left with an error that I cannot fix either myself, not with the help of Google.

script.R

...

ANSWER

Answered 2020-Aug-06 at 10:13

For the example data the issue seems to be that it does only cover 7 data points, and the configurator assumes that there it can window over more than 7 days. What worked for me was the following code (working in the sense that it does not throw an error).

Source https://stackoverflow.com/questions/63249020

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install EpiEstim

You can download it from GitHub.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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