crayon | ️ R package for colored terminal output | Command Line Interface library
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️ R package for colored terminal output
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QUESTION
I have a several lm
objects that I would like to loop into broom::tidy
using purrr::map
. Is this possible to do?
ANSWER
Answered 2022-Apr-10 at 20:47You need to keep your models in a list (list()
), not in a vector (c()
):
QUESTION
I am a beginner on mlr3 and am facing problems while running AutoFSelector learner associated to glmnet on a classification task containing >2000 numeric variables. I reproduce this error while using the simpler mlr3 predefined task Sonar. For note, I am using R version 4.1.2 (2021-11-01)on macOS Monterey 12.1. All required packages have been loaded on CRAN.
...ANSWER
Answered 2022-Jan-24 at 18:05This is a problem specific to glmnet
. glmnet
requires at least two features to fit a model, but in at least one configuration (the first ones in a sequential forward search) you only have one feature.
There are two possibilities to solve this:
- Open an issue in mlr3fselect and request a new argument
min_features
(there already ismax_features
) to be able to start the search with 2 or more features. - Augment the base learner with a fallback which gets fitted if the base learner fails. Here is fallback to a simple logistic regression:
QUESTION
WHAT I WANT: I'm trying to fit a GAM model for classification using tidymodels
on a given data.
SO FAR: I'm able to fit a logit model.
...ANSWER
Answered 2022-Jan-12 at 23:47This problem has been fixed in the developmental version of {parsnip} (>0.1.7). You can install it by running remotes::install_github("tidymodels/parsnip")
.
QUESTION
I have a list of dictionaries as below and I'd like to create a dictionary to store specific data from the list.
...ANSWER
Answered 2022-Jan-08 at 00:17If you don't have too much data, you can use this nested list/dictionary comprehension:
QUESTION
I'm trying to write a distill::distill_article
blogpost which requires the use of LaTeX math environments e.g. theorem, lemma, proof etc.
I have tried to follow these instructions and also these instructions but am unable to render the theorem
environments whether using LaTeX
blocks or rmarkdown blocks.
I also note that a similar question was asked about specifically using distill::distill_article
in bookdown
. This fix did not work either. Note that my use-case is to use the bookdown theorem environments inside distill::distill_article
, not the other way around.
Here is a reprex for the issue:
...ANSWER
Answered 2022-Jan-03 at 05:49Add this after the YAML and then the method between :::
will work:
QUESTION
I'm trying to create a code that will add milk to each list in a shopping cart (nested list). But if there is already milk in that list, milk should not be added to it.
...ANSWER
Answered 2021-Dec-23 at 17:23You don't need nested loops. You just need to loop over the main list, not the nested lists, so you can append to that list. You can use the in
operator to test if a list contains something, you don't do that by looping (your loop will falsely say that the list doesn't contain milk
when any of the elements are not milk
).
Also, get in the habit of using for item in list:
rather than for index in range(len(list)):
QUESTION
I'm trying to figure out a code that will go through all items of the list, and keep a count of how many times the given item occurs, without the count funtion!
This is my code:
...ANSWER
Answered 2021-Dec-22 at 22:35You can do something like this if you don't want to use any built-in method:
QUESTION
As of 18 Nov 2021, I've downloaded all the tar.gz files that tidyverse imports/depends/suggests. I'm working on a RedHat OS and, unfortunately, I don't have an Internet connection to this machine. I have all those files in a folder. Then I use this command
...ANSWER
Answered 2021-Nov-23 at 21:39Need to run tools::write_PACKAGES
before executing install.packages
.
Even though the tar.gz files are in the same folder, the PACKAGES file must be populated to properly account for dependencies. Otherwise, the install.packages function doesn't know how the packages are related. Would be nice if that error message was more specific.
QUESTION
I have downloaded Proteome Profiling data from the TCGA-LGG project with the Bioconductor package TCGAbiolinks
.
Then I have the following error when running GDCprepare
:
ANSWER
Answered 2021-Nov-16 at 07:31Support for proteome profiling has been provided in the package. To obtain the newest version the package should be installed from Github with the following command BiocManager::install("BioinformaticsFMRP/TCGAbiolinks")
(see here).
QUESTION
Since a few months, ggplot2 started to save png files with a transparent background. The code output in Rstudio and when saved as pdf looks great. It happens mainly with the use of themes when I omit the gray panel background. I tested it on my macbook with "Preview" and on a Windows Computer with the "foto viewer" there.
...ANSWER
Answered 2021-Nov-11 at 14:11Maybe indeed worth an answer for posterity...
Specify ggsave("test.png", dpi = 300, bg = "white")
Background (pun intended): the argument will be passed to grDevices::png
via the ...
argument. bg
controls the background of the device.
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