packrat | Packrat is a dependency management system for R

 by   rstudio R Version: v0.9.1 License: No License

kandi X-RAY | packrat Summary

kandi X-RAY | packrat Summary

packrat is a R library. packrat has no bugs, it has no vulnerabilities and it has low support. You can download it from GitHub.

Packrat is a dependency management system for R.
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            kandi-support Support

              packrat has a low active ecosystem.
              It has 391 star(s) with 94 fork(s). There are 29 watchers for this library.
              OutlinedDot
              It had no major release in the last 12 months.
              There are 229 open issues and 273 have been closed. On average issues are closed in 482 days. There are 5 open pull requests and 0 closed requests.
              It has a neutral sentiment in the developer community.
              The latest version of packrat is v0.9.1

            kandi-Quality Quality

              packrat has 0 bugs and 0 code smells.

            kandi-Security Security

              packrat has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              packrat code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              packrat does not have a standard license declared.
              Check the repository for any license declaration and review the terms closely.
              OutlinedDot
              Without a license, all rights are reserved, and you cannot use the library in your applications.

            kandi-Reuse Reuse

              packrat releases are available to install and integrate.
              Installation instructions, examples and code snippets are available.

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            packrat Key Features

            No Key Features are available at this moment for packrat.

            packrat Examples and Code Snippets

            No Code Snippets are available at this moment for packrat.

            Community Discussions

            QUESTION

            Cannot install R packages because "make" is not found, although Rtools is installed and PATH is included
            Asked 2022-Mar-18 at 11:28

            I am trying to run a packrat:restore() to restore all libraries in my project. When I run the command I get the following message:

            So it looks like the 'make' command is not present so that is why the package cannot be build. This executable is located in Rtools. I have Rtools 3.5 installed on my computer. The directory is in the PATH variable:

            And sure enough I find make executable in the directory

            However when I run the command Sys.which it doesn't return the path to the executable:

            I don't understand what the problem is. I have googled this issues and it was either suggested to install the new version of Rtools (however I am running R version 3.6.1, and the newest version of Rtools is for R version 4.x, so this doesn't make sense for me because I don't want to install the new R version), or to add the path of Rtools to the PATH, but is already configured.

            Any ideas?

            Thanks, Rok

            ...

            ANSWER

            Answered 2022-Mar-18 at 11:28

            I think you cannot have spaces in your PATH.

            To test on my system, I started with a PATH without access to make.exe.

            Source https://stackoverflow.com/questions/71526148

            QUESTION

            A simple CFG claimed to have no equivalent PEG, that seems to have one anyway
            Asked 2022-Jan-11 at 23:02

            In "Packrat Parsing: a Practical Linear-Time Algorithm with Backtracking" on page 30 the author states that the context-free grammar (CFG):

            ...

            ANSWER

            Answered 2022-Jan-11 at 23:02

            You just didn't test enough. Try inputs consisting of an odd number of as. All match the grammar but PEG only accepts those of length 2k−1 for some integer k.

            Source https://stackoverflow.com/questions/70671146

            QUESTION

            SVM prediction running fine in my computer but not in R Connect
            Asked 2021-Aug-06 at 04:41

            I’m creating a Shiny app that uses the caret package to do some SVM free-text analysis.

            The app runs fine without any error in my computer. I’m using R x64 4.0.4 and R studio 1.3.1093

            I’m deploying app to an internal enterprise server https://rconnect.xxxx.com/connect/#/apps/####

            This app is deployed in the server and started.
            But when I reach the line where I run the train function:

            ...

            ANSWER

            Answered 2021-Aug-05 at 01:15

            Errors like this in Shiny apps are almost always a result of missing packages, which the logs confirm.

            Turns out in this case I think the missing package is kernlab, which I only found by reading the documentation given here: https://topepo.github.io/caret/train-models-by-tag.html#Support_Vector_Machines. It's a suggested package, not imported, so the command suggested in the comments by heds1 would sort this out.

            Source https://stackoverflow.com/questions/68659043

            QUESTION

            Is there a way to eliminate these reduce/reduce conflicts?
            Asked 2021-Jul-04 at 16:56

            I am working on a toy language for fun, (called NOP) using Bison and Flex, and I have hit a wall. I am trying to parse sequences that look like name1.name2 and name1.func1().name2 and I get a lot of reduce/reduce conflicts. I know -why- am getting them, but I am having a heck of a time figuring out what to do about it.

            So my question is whether this is a legitimate irregularity that can't be "fixed", or if my grammar is just wrong. The productions in question are compound_name and compound_symbol. It seems to me that they should parse separately. If I try to combine them I get conflicts with that as well. In the grammar, I am trying to illustrate what I want to do, rather than anything "clever".

            ...

            ANSWER

            Answered 2021-Jul-04 at 16:56

            All of the reduce/reduce conflicts are the result of:

            Source https://stackoverflow.com/questions/68241807

            QUESTION

            How to Properly Store ShapeFiles when Deploying R Shiny App
            Asked 2020-Oct-28 at 02:41

            I am working on an R Shiny project to visualize the spread of COVID19 around the world. When I run the app locally, it works just fine, but when I try to deploy the app, it runs into issues which I am assuming are related to storing the shapefiles: I get an error on the map page that reads, "An error has occurred. Check your logs or contact the app author for clarification."

            Here is my code so far:

            ...

            ANSWER

            Answered 2020-Oct-28 at 02:41

            Files required by a published Shiny app should go in a folder named www. If you've got them in the same folder as app.R, they won't be detected properly. No idea why, honestly, but here's a couple resources that mention it:

            https://shiny.rstudio.com/images/shiny-cheatsheet.pdf

            https://subscription.packtpub.com/book/application_development/9781785280900/8/ch08lvl1sec53/the-www-directory

            Source https://stackoverflow.com/questions/64565574

            QUESTION

            Packrat::restore() for system dependencies
            Asked 2020-Sep-23 at 20:21

            I was developing a shiny-app on a Windows machine in Rstudio. Now I need to develop it on a Linux machine and later on will need to deploy it on a server. Because of the need to run the app across platforms, I was looking into some environment control application so that I don't have to tune and reinstall the needed packages manually.

            I tried to use Packrat for this purpose. I made a snapshot on my Windows machine, copied and pasted the project to my Ubuntu, reopened the project on RStudio, installed Packrat and the restore of the packages ran automatically. Then I ran into an issue that some of the packages that requires system dependencies were not installed automatically, e.g. rgdal and jqr. Therefore, I had to manually install those system dependencies manually in a terminal (it took me a while because there were about 10 of them that requires extra system dependencies).

            I am wondering if there is an easier way to just automatically handle this. Later on, I will need to work with a system administer to deploy the app to the server. I am wondering if Packrat has the capability of automatically installing system dependencies on Linux machine/server. If anyone has encounter this issue before, or have other better options, please let me know!

            Thank you!

            ...

            ANSWER

            Answered 2020-Sep-23 at 20:21

            Hello and welcome to StackOverflow.

            You are facing a question that is actually much harder to tackle than you may think at first---deployment of complex R package dependencies across different operating systems is a truly hard and, truth be told, unsolved problem!

            You can of course use packrat and renv for R package dependencies and snapshots of particular versions. But this does not do anything for system-level dependencies which are simply taken as "given". So no to just transfering to another box and saying "abracadabra". Sorry!

            The closest we all may have gotten to fixing this may be Docker where you can create a portable unit of execution that can be deployed whereever Docker run: Windows, macOS, different Linux flavours, ... as it encodes everything.

            Source https://stackoverflow.com/questions/64035561

            QUESTION

            How to avoid left-recursion infinite loops in Fastparse?
            Asked 2020-Aug-08 at 19:19

            I had a parser that worked well in Scala Packrat parser combinators. I would like to try something faster with the Fastparse library. However, it cannot handle left-recursion infinite loops. Is there any standard way to cope with that?

            ...

            ANSWER

            Answered 2020-Aug-08 at 19:19

            I don't know much about Fastparse, but I'll try to answer your question nevertheless. Right now, your grammar looks something like this:

            Source https://stackoverflow.com/questions/63027937

            QUESTION

            How to run command inside Docker container
            Asked 2020-Jul-08 at 07:30

            I'm new to Docker and I'm trying to understand the following setup.

            I want to debug my docker container to see if it is receiving AWS credentials when running as a task in Fargate. It is suggested that I run the command:

            ...

            ANSWER

            Answered 2020-Jul-08 at 07:01

            For running a command inside docker container you need to be inside the docker container.

            Step 1: Find the container ID / Container Name that you want to debug

            docker ps A list of containers will be displayed, pick one of them

            Step 2 run following command docker exec -it bash and then enter wait for few seconds and you will be inside the docker container with interactive mode Bash

            for more info read https://docs.docker.com/engine/reference/commandline/exec/

            Source https://stackoverflow.com/questions/62789117

            QUESTION

            Is there an up to date heroku buildpack for R
            Asked 2020-May-30 at 02:08

            I am using the virtualstaticvoid buildpack for heroku, but it is on the heroku-16 stack and only supports up to version 3.4.4 of R. I am after a buildpack that works on the latest stack (heroku-18) and supports at least version 3.6 of R, and has no outdated dependencies. The hmdc buildpack appears to support heroku-18 and version 3.6.0 of R, but requires packrat which is soft deprecated in favour of renv.

            ...

            ANSWER

            Answered 2020-May-30 at 02:08

            Some good news, virtual_static_void has been updated so the R buildpack now uses version 3.6.3, works on both heroku-18 and heroku-16 stacks, and it supports renv.

            Source https://stackoverflow.com/questions/61297567

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

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            Install packrat

            Please view the set-up guide here for a simple walkthrough in how you might set up your own, local, custom CRAN repository.

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