npy | Save and load NumPy npy and npz files in Ruby | Data Manipulation library
kandi X-RAY | npy Summary
kandi X-RAY | npy Summary
Save and load NumPy npy and npz files in Ruby - no Python required. :fire: Uses Numo for blazing performance.
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QUESTION
I'm trying to load a .npy
file and resize it with cv2.resize
but I get the following error message:
cv2.error: OpenCV(4.5.1-dev) /home/name/opencv_build/opencv/modules/imgproc/src/resize.cpp:3688: error: (-215:Assertion failed) !dsize.empty() in function 'resize'
This is my code:
...ANSWER
Answered 2021-Jun-14 at 07:05images in opencv should only have 2 dim if grayscale/single channel or 3 dim if color. you seem to have a gray/single channel image [192,640] thats wrapped in 2 lists [1,1,---]
so to get the image you need to get it from inside those 2 lists.
img = np.load(filepath)[0][0]
or if you are not sure how many lists its wrapped in, you can do
img = np.squeeze(np.load(filepath)
but that will work as long as there is only 1 image in those lists
QUESTION
I have this 4D array (numpy.ndarray) that I need to save in a way that its format does not change as I save it (since it should remain unchanged), and then reuse it in my Google Colab file. I have tried saving it in different formats and when I upload it and preview it within my code, the previous format is no longer preserved even when I save it in the .npy format. I have also tried importing the date using the raw link from my GitHub repository or uploading it from my local device, but still no chance. I would appreciate your comments regarding the issue!
Further elaboration:
Here is the code that I use to generate my 4D array:
...ANSWER
Answered 2021-Jun-10 at 17:43Usual np.save
, np.load
works
QUESTION
I tried reading into R a boolean vector stored as a numpy array (.npy) with RcppCNPy
package like this:
ANSWER
Answered 2021-May-28 at 12:08EDIT:
The only way I found so far without modifying the numpy
array itself is to use the reticulate
package in R:
The reticulate package provides a comprehensive set of tools for interoperability between Python and R. The package includes facilities for translation between R and Python objects (for example, between R and Pandas data frames, or between R matrices and NumPy arrays).
Usage would be like this:
QUESTION
I am getting some results in the form of np.arrays of size (no_of_rows
, 2), where no_of_rows
varies from array to array.
I want to save these results to disk for later usage (plotting). In any way, it doesn't matter how, but if possible in the most efficient way in terms of REOPENING/USING time-consumed-wise.
I can do anything with these 2D arrays. My thought was to create a .npy
file containing a 3D tensor of shape (no_of_matrices, ? , 2), but that ? is my problem. Each 2D array can potentially have a different no_of_rows
. So I abandoned this idea.
I now made a list of these 2D np.arrays. I now want to save that list to disk.
I have read about np.savez
, but this doesn't preserve the order of saving. That is, when loading back in memory, I won't know which array is which, apart from many if's statements to check the no_of_lines
of each array and match it to what it means for when plotting it later.
Do I have any chance to store these arrays in 1 SINGLE file, or do I just have to resort to creating multiple files, named in a distinctive way, one for each 2D array, and then access these files individually when plotting?
[PS: I can only have a maximum of 100-ish of such 2D arrays, usually having less than 10.]
Thanks
...ANSWER
Answered 2021-May-27 at 12:36You can use npz with key arguments to identify each array and thus no longer have a problem of non preserving order.
QUESTION
I have the following code:
...ANSWER
Answered 2021-May-26 at 13:57if you use pathlib.Path
objects you could use Path.stem
to get a filename minus the extension
QUESTION
I need to do Semantic image segmentation based on Unet.
I have to work with Pascal VOC 2012 dataset, however I don't know how to do it, do I manually select images for the train & val and convert them into numpy and then load them into the model? Or is there another way?
If this is the first one I would like to know how to convert all the images present in a folder into .npy.
...ANSWER
Answered 2021-May-01 at 00:09if i understood correctly, you just need to go through all the files from the folder and add them to the numpy table?
QUESTION
I have a folder in which I have 100+ .npy files. The path to this folder is '/content/drive/MyDrive/lung_cancer/subset0/trainImages'.
This folder has the .npy files as shown in the image the .npy files
The shape of each of these .npy files is (3,512,512)
I want to combine all of these files into one single file with the name trainImages.npy so that I can train my unet model with it.
My unet model takes input of the shape (1,512,512). I will load the above trainImages.npy file into imgs_train as below to pass it as input into unet model
imgs_train = np.load(working_path+"trainImages.npy").astype(np.float32)
Can someone please tell me how do i concatenate all those .npy files into one single .npy file?? Thanks.
...ANSWER
Answered 2021-Apr-30 at 13:27So I found the answer out by myself and I am attaching the code below if anyone needs it. Change it according to your needs..
QUESTION
I'm currently training my first neural network on a larger dataset. I have splitted my training data to several .npy binary files, that each contain batches of 20k training samples. I'm loading the data from the npy files, apply some simple pre-processing operations, and then start to train my network by applying the partial_fit
method several times in a loop:
ANSWER
Answered 2021-Apr-29 at 15:18There are several possibilities.
- The model may have converged
- There may not be enough passes over the batches (in the example below the model doesn't converge until ~500 iterations)
- (Need more info) the
joblib.dump
andjoblib.load
may be saving or loading in an unexpected way
Instead of calling a script multiple times and dumping the results between iterations, it might be easier to debug if initializing/preprocessing/training/visualizing all happens in one script. Here is a minimal example:
QUESTION
I thought it's easy to deploy a python api project to somewhere. BUT I was wrong, I cannot deploy to any platforms.
So far I have tried:
- Azure, Webapp and Function App
- PythonAnywhere
- Heroku
They all have issues when I'm trying to install dependency packages for this one:
scikit-fmm
here is the error message:
Python Version is 3.7.10 Linux
...ANSWER
Answered 2021-Apr-22 at 03:46UPDATE
After my test, because the latest version of scikit-fmm
is not compatible with azure web app, I used the scikit-fmm==2021.1.21
version. It works for me.
Thanks for Glenn's reminder, you can use below cmd in webssh.
QUESTION
I have this code:
...ANSWER
Answered 2021-Apr-18 at 17:11Based on your script, you have little experience with numpy in general. Numpy is optimized with SIMD instructions and your code kinda defeats it. I would advise you to review the basics on how to write numpy code
Please review this cheat sheet. https://s3.amazonaws.com/assets.datacamp.com/blog_assets/Numpy_Python_Cheat_Sheet.pdf
For instance, this code can be changed from
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