iou | Rust interface | Wrapper library
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Rust interface to io_uring
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QUESTION
I am using consistency between two predicted segmentation maps on unlabeled data. For labeled data, I’m using nn.BCEwithLogitsLoss and Dice Loss.
I’m working on videos that’s why 5 dimensions output. (batch_size, channels, frames, height, width)
I want to know how can we compare two predicted segmentation maps.
...ANSWER
Answered 2021-May-25 at 14:24Yes, this is a valid way to implement consistency loss. The nomenclature used by pytorch documentation lists one input as the target and the other as the prediction, but consider that L1, L2, Dice, and IOU loss are all symmetrical (that is, Loss(a,b)
= Loss(b,a)
). So any of these functions will accomplish a form of consistency loss with no regard for whether one input is actually a ground-truth or "target".
QUESTION
So I'm using the Darknet Framework with YoloV4. This is my yolo_image.py code:
...ANSWER
Answered 2021-May-06 at 14:26When you use OpenCV's imshow()
, it needs to be followed with a call to waitKey()
. The HighGUI's event loop wont run until waitKey()
is called.
In your case, the process gets to the end, meaning the programme ends, and so the window you create is immediately destroyed.
You should have a look at darknet_images.py
and darknet_video.py
in the darknet repo.
QUESTION
I'm having trouble understanding control flow with asynchronous programming in JS. I come from classic OOP background. eg. C++. Your program starts in the "main" -- top level -- function and it calls other functions to do stuff, but everything always comes back to that main function and it retains overall control. And each sub-function retains control of what they're doing even when they call sub functions. Ultimately the program ends when that main function ends. (That said, that's about as much as I remember of my C++ days so answers with C++ analogies might not be helpful lol).
This makes control flow relatively easy. But I get how that's not designed to handle event driven programming as needed on something like a web server. While Javascript (let's talk node for now, not browser) handles event-driven web servers with callbacks and promises, with relative ease... apparently.
I think I've finally got my head around the idea that with event-driven programming the entry point of the app might do little more than set up a bunch of listeners and then get out of the way (effectively end itself). The listeners pick up all the action and respond.
But sometimes stuff still has to be synchronous, and this is where I keep getting unstuck.
With callbacks, promises, or async/await, we can effectively build synchronous chains of events. eg with Promises:
...ANSWER
Answered 2021-Apr-29 at 18:40What you do with the .then
call is to attach a function which will run when the Promise resolves in a future task. The processing of that function is itself synchronous, and can use all the control flows you'd want:
QUESTION
I am using the Image segmentation guide by fchollet to perform semantic segmentation. I have attempted modifying the guide to suit my dataset by labelling the 8-bit img mask values into 1 and 2 like in the Oxford Pets dataset which will be subtracted to 0 and 1 in class Generator(keras.utils.Sequence)
.The input image is an RGB-image.
I am not sure why but my dice coefficient isn't increasing at all. I have tried to reduce the learning rate as well as changing the optimizer to SGD/RMSProp, normalizing the data, taking the imbalanced labels into account but the result is very strange. The accuracy/IoU of the model is decreasing as the no. of epochs increases.
If it helps, I previously asked a question about the metrics that I should be using for an imbalanced dataset here. The visualization of the predictions are okay but the metric is not.
What I can do next to debug this problem? Is there anything wrong with my code? Will appreciate any advice.
Here are the results
...ANSWER
Answered 2021-Apr-13 at 17:31The model output was wrong. It was supposed to be a sigmoid activation function with 1 output channel. Changing output_layer = Conv2D(nclasses, 3, activation="softmax", padding="same")(output_layer)
to output_layer = Conv2D(1, 1, activation="sigmoid", padding="same")(output_layer)
solved my problem.
Also, I decided to use True Positive Rate (TPR) also commonly known as recall/sensitivity/probability of detection as my main metric after reading this post.
QUESTION
I am using the Image segmentation guide by fchollet to perform semantic segmentation. I have attempted modifying the guide to suit my dataset by labelling the 8-bit img mask values into 1 and 2 like in the Oxford Pets dataset. (which will be subtracted to 0 and 1 in class OxfordPets(keras.utils.Sequence):
)
Question is how do I get the IoU metric of a single class (e.g 1)?
I have tried different metrics suggested by Stack Overflow but most of suggest using MeanIoU which I tried but I have gotten nan loss as a result. Here is an example of a mask after using autocontrast.
PIL.ImageOps.autocontrast(load_img(val_target_img_paths[i]))
The model seems to train well but the accuracy was decreasing over time.
Also, can someone help explain how the metric score can be calculated from y_true
and y_pred
? I don't quite fully understand when the label value is used in the IoU metric calculation.
ANSWER
Answered 2021-Mar-26 at 11:29I had a similar problem back then. I used jaccard_distance_loss
and dice_metric
. They are based on IoU. My task was a binary segmentation, so I guess you might have to modify the code in case you want to use it for a multi-label classification problem.
QUESTION
When I train yolo v4, I get a lot of outputs that I later want to use to plot learning rate changes.
With max_batches = 1543 darknet prints 74064 outputs (with loss etc, I don't count outputs with mAP calculation, network definition etc). With batch = 32, subdivisions = 16, I have only 49376 itarations (defined as single images passed through network)!
Something is definitely off, does anybody know how often this binary is supposed to print values?
...ANSWER
Answered 2021-Feb-23 at 08:22It seems that the outputs from binary are printed in yolo_layer.c. Yolo v4 has 3 yolo layers. The batch size recorded by yolo layers = 2 (global_batch_size/subdivisions). 16 forward passes per batch * 1543 batches * 3 prints per forward pass = 74064
Which makes sense.
QUESTION
I have the fields, group_id
, category
, account
, sku
and revenue
. I want to do an aggregation where the revenue is grouped by the group_id
, category
, sku
and account
separately and in sku
there will be two divisions, one where there is a comma and one where there isn't. How do I do this?
For example, if my data is
...ANSWER
Answered 2021-Mar-26 at 12:38You can use $facet to run multiple aggregations separately in one round-trip and $indexOfBytes to split skus
:
QUESTION
I have a DataFrame which has Date in it, where the dtype of Date is 'OBJECT'. Now, I need the column names of those which don't have the date in them. I have written code for it but at the end the column names are not getting appended into the list. I really don't know why it is not appending. Can anyone help me with this?
...ANSWER
Answered 2021-Mar-16 at 22:54It looks like col_name
QUESTION
I'm looking for the fastest way to compute the intersection over union (Jaccard Index) of two binary masks (2d arrays of 1s and 0s) in numpy of the exact same shape. My code for computing this is:
...ANSWER
Answered 2021-Mar-12 at 18:19I initialy posted an answer, realised I'd over complicated it and when I went to edit it found the timings were worse than the original function. That's been deleted.
The code in the question performs close to the others.
There's no need for the two maskN == 1
in the logical_and
.
The dtype can have a significant effect. bm1
is much faster If it's np.bool but it depends what else is being done with the data.
If it's possible to change the dtype there may be some significant time savings otherwise I can't see much, perhaps somebody else can.
QUESTION
I trained multiple models with different configuration for a custom hyperparameter search. I use pytorch_lightning and its logging (TensorboardLogger). When running my training script after Task.init() ClearML auto-creates a Task and connects the logger output to the server.
I log for each straining stage train
, val
and test
the following scalars at each epoch: loss
, acc
and iou
When I have multiple configuration, e.g. networkA
and networkB
the first training log its values to loss
, acc
and iou
, but the second to networkB:loss
, networkB:acc
and networkB:iou
. This makes values umcomparable.
My training loop with Task initalization looks like this:
...ANSWER
Answered 2021-Feb-19 at 22:31Disclaimer I'm part of the ClearML (formerly Trains) team.
pytorch_lightning
is creating a new Tensorboard for each experiment. When ClearML logs the TB scalars, and it captures the same scalar being re-sent again, it adds a prefix so if you are reporting the same metric it will not overwrite the previous one. A good example would be reporting loss
scalar in the training phase vs validation phase (producing "loss" and "validation:loss"). It might be the task.close()
call does not clear the previous logs, so it "thinks" this is the same experiment, hence adding the prefix networkB
to the loss
. As long as you are closing the Task after training is completed you should have all experiments log with the same metric/variant (title/series). I suggest opening a GitHub issue, this should probably be considered a bug.
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