metaRNA-seq | Custom scripts for creating and annotating multispecies | Data Labeling library

by khturner Shell Version: v1.0 License: Non-SPDX

X-Ray Key Features Code Snippets Community Discussions(3)Vulnerabilities Install Support

kandi X-RAY | metaRNA-seq Summary

metaRNA-seq is a Shell library typically used in Artificial Intelligence, Data Labeling applications. metaRNA-seq has no bugs, it has no vulnerabilities and it has low support. However metaRNA-seq has a Non-SPDX License. You can download it from GitHub.

Copyright (c) 2013 Peter A. Jorth, Keith H. Turner, Pinar Gumus, Nejat Nizam, Nurcan Buduneli, Marvin Whiteley. The scripts contained herein can be used to assemble .gff and .fna files representing a multispecies bacterial "metaorganism" for bioinformatic analyses. Brief descriptions of the scripts follow, but also see the scripts themselves and the usage instructions on the command line for information about how to use them. Please direct any questions on their use or construction to Keith H. Turner (khturner at utexas.edu). This program takes a GFF file from GenomeMerge.pl on STDIN, searches for the locus_tag and returns a new GFF file with EC and Kegg pathway information on STDOUT. usage: ./PullEC.pl < (in).gff > (out.gff).

Support

Quality

Security

License

Reuse

Support

metaRNA-seq has a low active ecosystem.

It has 4 star(s) with 2 fork(s). There are 2 watchers for this library.

It had no major release in the last 12 months.

metaRNA-seq has no issues reported. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of metaRNA-seq is v1.0

Quality

metaRNA-seq has no bugs reported.

Security

metaRNA-seq has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

metaRNA-seq has a Non-SPDX License.

Non-SPDX licenses can be open source with a non SPDX compliant license, or non open source licenses, and you need to review them closely before use.

Reuse

metaRNA-seq releases are available to install and integrate.

Installation instructions are not available. Examples and code snippets are available.

Top functions reviewed by kandi - BETA

kandi's functional review helps you automatically verify the functionalities of the libraries and avoid rework.
Currently covering the most popular Java, JavaScript and Python libraries. See a Sample of metaRNA-seq

Get all kandi verified functions for this library.

metaRNA-seq Key Features

No Key Features are available at this moment for metaRNA-seq.

metaRNA-seq Examples and Code Snippets

No Code Snippets are available at this moment for metaRNA-seq.

Community Discussions

Trending Discussions on Data Labeling

How can I do this split process in Python?

Replacing a character with a space and dividing the string into two words in R

Azure ML FileDataset registers, but cannot be accessed for Data Labeling project

QUESTION

How can I do this split process in Python?

Asked 2021-Dec-30 at 14:06

I'm trying to make a data labeling in a table, and I need to do it in such a way that, in each row, the index is repeated, however, that in each column there is another Enum class.

What I've done so far is make this representation with the same enumerator class.

A solution using the column separately as a list would also be possible. But what would be the best way to resolve this?

...

ANSWER

Answered 2021-Dec-30 at 13:57

Instead of using Enum you can use a dict mapping. You can avoid loops if you flatten your dataframe:

Source https://stackoverflow.com/questions/70532286

QUESTION

Replacing a character with a space and dividing the string into two words in R

Asked 2020-Nov-18 at 07:32

I have a dataframe that contains a column that includes strings separeted with semi-colons and it is followed by a space. But unfortunately in some of the strings there is a semi-colon that is not followed by a space.

In this case, This is what i'd like to do: If there is a space after the semi-colon we do not need a change. However if there are letters before and after the semi-colon, we should change semi-colon with space

i have this:

...

ANSWER

Answered 2020-Nov-16 at 07:24

Try something like:

Source https://stackoverflow.com/questions/64853962

QUESTION

Azure ML FileDataset registers, but cannot be accessed for Data Labeling project

Asked 2020-Oct-28 at 20:31

Objective: Generate a down-sampled FileDataset using random sampling from a larger FileDataset to be used in a Data Labeling project.

Details: I have a large FileDataset containing millions of images. Each filename contains details about the 'section' it was taken from. A section may contain thousands of images. I want to randomly select a specific number of sections and all the images associated with those sections. Then register the sample as a new dataset.

Please note that the code below is not a direct copy and paste as there are elements such as filepaths and variables that have been renamed for confidentiality reasons.

...

ANSWER

Answered 2020-Oct-27 at 22:39

Is the data behind virtual network by any chance?

Source https://stackoverflow.com/questions/64546521

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install metaRNA-seq

You can download it from GitHub.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

Find more information at: