autodiff | Symbolic differentiation engine | Machine Learning library
kandi X-RAY | autodiff Summary
kandi X-RAY | autodiff Summary
Symbolic differentiation engine for optimization-based machine learning models.
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QUESTION
I am trying to get the Coriolis matrix for my robot (need the matrix explicitly for the controller) based on the following approach which I have found online:
...ANSWER
Answered 2021-Jun-15 at 14:00You are close. You need to tell the autodiff pipeline what you want to take the derivative with respect to. In this case, I believe you want
QUESTION
I see the current chapter of Underactuated: System Identification and the corresponding notebook, and it currently does it through symbolics.
I'd like to try out stuff like system identification using forward-mode automatic differentiation ("autodiff" via AutoDiffXd
, etc.), just to check things like scalability, get a better feel for symbolics and autodiff options in Drake, etc.
As a first steps towards system identification with autodiff, how do I take gradients of MultibodyPlant
quantities (e.g. generalized forces, forward dynamics, etc.) with respect to inertial parameters (say mass)?
- Note: Permalinks of Underactuated chapter + notebook at time of writing: sysid.html, sysid.ipynb
ANSWER
Answered 2021-Jun-09 at 12:41Drake's formulation of MultibodyPlant
, in conjunction with the Drake Systems framework, can allow you to take derivatives (via autodiff) with respect to inertial parameters by using the parameter accessors of RigidBody
on the given plant's Context
.
Please see the following tutorial:
https://nbviewer.jupyter.org/github/RobotLocomotion/drake/blob/nightly-release/tutorials/multibody_plant_autodiff_mass.ipynb
QUESTION
I would like to convert a SymPy expression in order to use as an objetive function in JuMP. Suppose my variable involves two variables
...ANSWER
Answered 2021-May-31 at 20:11My answer from Discourse:
QUESTION
I have been trying to get a linearized version of a MultiBodyPlant without gravity to experiment with LQR for systems without gravity. However, the linearization leads to some interesting phenomena. A simplified example can be found in this google colab notebook.
When I linearize and check the rank of the controllability matrix for a single free-floating rigid body, I get a rank of 6. This is expected as I use the get_applied_generalized_force_input_port()
as the input port, hence making sure that all possible forces can be applied to the system. The system of a single rigid body has 6 degrees of freedom (DoF) and the rank of the controllability matrix is 6, hence it is controllable.
However, when I use Drake's in-built function IsControllable()
to check the controllability, it results False
meaning that it thinks the system is not controllable. In the source of the IsControllable()
function, the rank of the matrix is checked against the number of rows in the A
matrix. I think that this might be causing an issue as the linearization involves the use of quaternions during the AutoDiff (thus adding one more row to the A
matrix due to 4 numbers being used for quaternions to represent the state). The linearization process does not know about the unit-quaternion constraint, and hence the A
matrix for a system using quaternions will have 1 more row than the DoF of the system.
I wonder if this is the correct intuition for the controllability mismatch?
And could this cause issues as other functions within Drake that maybe use the IsControllable()
function for verifying controllability?
ANSWER
Answered 2021-May-30 at 00:38I think IsControllable()
is doing the right thing. If you have a single body with a floating base, then you have 13 state variables (7 positions, 6 velocities). If you were to simply linearize the equations, then you are right that the resulting linear system would not know about the unit quaternion constraint. Asking for controllability of this system would be asking you to drive the system to the origin (quaternion => 0 ~= unit quaternion). Since your dynamics model cannot achieve that, even in the linearization, I expect your system is not controllable in that linearization.
You could replace the quaternion floating base with a roll-pitch-yaw floating base. We have some API that will make that easier coming in https://github.com/RobotLocomotion/drake/issues/14949 . But in the mean time, you can add the three translations and a BallRpyJoint.
The alternative to look into the literature on control in SE(3) directly using quaternions. There are elegant results there, but linear analysis won’t help.
QUESTION
By this I mean, can I include it in a loss function and have autodiff function properly?
The raw_ops
docs (https://www.tensorflow.org/api_docs/python/tf/raw_ops) has no listing for sort
or argsort
.
ANSWER
Answered 2021-May-12 at 10:06I run the following experiment in colab
QUESTION
Given a neural network with weights theta and inputs x, I am interested in calculating the partial derivatives of the neural network's output w.r.t. x, so that I can use the result when training the weights theta using a loss depending both on the output and the partial derivatives of the output. I figured out how to calculate the partial derivatives following this post. I also found this post that explains how to use sympy to achieve something similar, however, adapting it to a neural network context within pytorch seems like a huge amount of work and a recipee for very slow code.
Thus, I tried something different, which failed. As a minimal example, I created a function (substituting my neural network)
...ANSWER
Answered 2021-Feb-24 at 21:12Your approach to the problem appears overly complicated. I believe that what you're trying to achieve is within reach in PyTorch. I include here a simple code snippet that I believe showcases what you would like to do:
QUESTION
I am trying to convert the following pydrake code to C++ version. Unfortunately,I get lost in the very rigorous C++ API documentation. Could you help to convert the following code into C++ version for a tutorial? Thank you so much!
...ANSWER
Answered 2021-Jan-24 at 19:33Since you used the name "cost", I suppose you want to use this as a cost in drake's MathematicalProgram, so I created MyCost
class which can be used in Drake's MathematicalProgram. If you don't want to use MathematicalProgram later, you could just use the templated function DoEvalGeneric
only without the class MyCost
.
Here is the C++ pseudo-code (I didn't compile or run the code, so it is highly likely there are bugs in the code, but you get the idea)
QUESTION
I am using PyDrake do build a simple model of a Franka Emika Panda robot arm which picks up and places a brick.
I would like to observe how a change in the initial chosen starting position of my brick affects a custom target loss function. Therefore, I would like to use the AutoDiffXd
functionality built into Drake to automatically extract the derivative of my loss function at the end of simulation with respect to my initial inputs.
I build my system with as normal, then run ToAutoDiffXd()
to convert the respective systems to an autodiff version. However, I get the following error:
ANSWER
Answered 2021-Jan-15 at 02:30Your deductions look correct to me, except perhaps the very last comment about MathematicalProgram
. MathematicalProgram
knows how to consume AutoDiffXd
, but to take the gradient of the solution of a MathematicalProgram
optimization, one needs to take the gradients of the optimality conditions (KKT). We have an issue on this here: https://github.com/RobotLocomotion/drake/issues/4267. I will cross-post this issue there to see if there is any update.
Depending on what you are trying to do with inverse kinematics, it might be that a simpler approach (taking the pseudo-inverse of the Jacobian) would work just fine for you. In that workflow, you would write your own DifferentialInverseKinematics
system like in http://manipulation.csail.mit.edu/pick.html and make it support AutoDiffXd
. (This could happen in either python or c++).
QUESTION
newbie here
I'm trying to minimize a function in Julia with optim.jl. The function works, but when I try to optimize it it gives me this error message:
...ANSWER
Answered 2021-Jan-06 at 12:19You can replicate your error via:
QUESTION
Does np.linalg.solve() not work for AutoDiff? I use is to solve manipulator equation. The error message is shown below. I try a similar "double" version code, it is no issue. Please tell me how to fix it, thanks!
...ANSWER
Answered 2020-Oct-29 at 21:01Note that in pydrake, AutoDiffXd
scalars are exposed to NumPy using dtype=object
.
There are some drawbacks to this approach, like what you have ran into now.
This is not necessarily an issue with Drake, but a limitation on NumPy itself given the ufunc's that are implemented on the (super old) version that is on 18.04.
To illustrate, here is what I see on Ubuntu 18.04, CPython 3.6.9, NumPy 1.13.3:
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