gsl | Go wrappers for CBLAS w/o dependencies

 by   barnex C Version: Current License: GPL-3.0

kandi X-RAY | gsl Summary

kandi X-RAY | gsl Summary

gsl is a C library. gsl has no bugs, it has no vulnerabilities, it has a Strong Copyleft License and it has low support. You can download it from GitHub.

Go wrappers for part of the GNU Scientific library. This package does not depend on a GSL installation (GSL source files are embedded in this go package and statically linked).
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              gsl has a low active ecosystem.
              It has 7 star(s) with 1 fork(s). There are 2 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              gsl has no issues reported. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of gsl is current.

            kandi-Quality Quality

              gsl has no bugs reported.

            kandi-Security Security

              gsl has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              gsl is licensed under the GPL-3.0 License. This license is Strong Copyleft.
              Strong Copyleft licenses enforce sharing, and you can use them when creating open source projects.

            kandi-Reuse Reuse

              gsl releases are not available. You will need to build from source code and install.

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            gsl Examples and Code Snippets

            No Code Snippets are available at this moment for gsl.

            Community Discussions

            QUESTION

            Why is the GNU scientific library matrix multiplication slower than numpy.matmul?
            Asked 2021-Jun-06 at 19:52

            Why is it that the matrix multiplication with Numpy is much faster than gsl_blas_sgemm from GSL, for instance:

            ...

            ANSWER

            Answered 2021-Jun-06 at 19:52

            TL;DR: the C++ code and Numpy do not use the same matrix-multiplication library.

            The matrix multiplication of the GSL library is not optimized. On my machine, it runs sequentially, does not use SIMD instructions (SSE/AVX), does not efficiently unroll the loops to perform register tiling. I also suspect it also does not use the CPU cache efficiently due to the lack of tiling. These optimizations are critical to achieve high-performance and widely used in fast linear algebra libraries.

            Numpy uses a BLAS library installed on your machine. On many Linux platform, its uses OpenBLAS or the Intel MKL. Both are very fast (they use all the methods described above) and should run in parallel.

            You can find which implementation of BLAS is used by Numpy here. On my Linux machine, Numpy use by default CBLAS which internally use OpenBLAS (OpenBLAS is strangely not directly detected by Numpy).

            There are many fast parallel BLAS implementations (GotoBLAS, ATLAS, BLIS, etc.). The open-source BLIS library is great because its matrix multiplication is very fast on many different architectures.

            As a result, the simplest way to improve your C++ code is to use the cblas_sgemm CBLAS function and link a fast BLAS library like OpenBLAS or BLIS for example.

            For more information:

            One simple way to see how bad the GSL perform is to use a profiler (like perf on Linux or VTune on Windows). In your case Linux perf, report that >99% of the time is spent in libgslcblas.so (ie. the GSL library). More specifically, most of the execution time is spent in this following assembly loop:

            Source https://stackoverflow.com/questions/67549023

            QUESTION

            Use 'make' and 'g++' on Windows OR how to get karambola working on windows
            Asked 2021-May-19 at 09:50

            My goal: Install karambola on my Windows 10 maschine.

            To install karambola I need the make command, which was never found with any programm. The only thing that worked was using GnuWin32 (when I was in the karambola directory):

            ...

            ANSWER

            Answered 2021-May-18 at 09:58

            Whatever distribution you are trying to use (Cygwin, Mingw, Linux Debian, Fedora..) some programs are NOT installed by default. As not anyone is a C++ programmer, you need to install/add the dedicated packages that contails the tools, compiler, header, libraries you need for your task.

            For example Cygwin has almost 10000 packages:
            https://cygwin.com/packages/package_list.html

            So you need make, g++ and at least the gsl development package.
            Use cygcheck -p to find the package that contains the program:

            Source https://stackoverflow.com/questions/67575516

            QUESTION

            When to use Data.Coerce?
            Asked 2021-May-02 at 20:46

            In the inline-c package, there's an example calling the C library GNU Scientific Library gsl from Haskell.

            ...

            ANSWER

            Answered 2021-May-02 at 20:46

            The type of solveOdeC is almost the same as the type for solveOde. The former type involves CDouble at several points, including inside Vectors and Either. The latter instead uses Double.

            The code relies on CDouble and Double having the same representation. Because of that, using coerce one can define a function by simply calling the other one with essentially zero overhead. Without that, one would need to create a new Vector which would be bitwise identical to the first one only to satisfy the type checker, spending O(N) for this overhead.

            To be honest, I find the definition in the library unnecessarily verbose. One could have written, instead,

            Source https://stackoverflow.com/questions/67360657

            QUESTION

            cannot find -lgsl, cannot find -lgslcblas
            Asked 2021-Mar-23 at 21:00

            I am trying to install a R package on windows 10 using "R CMD INSTALL Rpkg" and I am getting the following error:

            ...

            ANSWER

            Answered 2021-Mar-23 at 21:00

            I figured out the solution for the issue. First of all, I do not need to install a separate gsl library to use with R. So, I removed the gsl library I installed earlier into C:\R_soft\R\local323. Then I opened the msys2 shell in rtools and ran pacman -S mingw-w64-x86_64-gsl. This installs gsl library to mingw64 folder in rtools (default folder used by rtools to store C++ libraries). See https://packages.msys2.org/package/mingw-w64-x86_64-gsl for more about the gsl package information.

            Source https://stackoverflow.com/questions/66756295

            QUESTION

            Intuitive GSL stiff EDO
            Asked 2021-Mar-21 at 08:58

            I need to solve an ODE that has stiff behaviour. Said ODE would be given by

            ...

            ANSWER

            Answered 2021-Mar-21 at 08:58

            To manually implement an algorithmic differentiation it helps to include explicit intermediary steps

            Source https://stackoverflow.com/questions/66727414

            QUESTION

            Error: not found when building inkscape
            Asked 2021-Mar-19 at 20:36

            I'm using Ubuntu 20.04.2 LTS.

            I've downloaded the source code with the command:

            ...

            ANSWER

            Answered 2021-Mar-19 at 19:32

            There is a particular section in the inkskape documentation about your question

            The major steps:

            Source https://stackoverflow.com/questions/66714087

            QUESTION

            In the MATLAB mexFunction how do you assign GNU Scientific Library matrices and vectors to plhs?
            Asked 2021-Mar-17 at 21:15

            I have MATLAB code that I want to call the GNU Scientific Library (GSL) C library to compute the singular value decomposition of a matrix. Basically, I need to implement the gateway MEX function. I see how to set the input variables, but how do I set the output variables?

            Here is my code so far:

            build.m ...

            ANSWER

            Answered 2021-Mar-17 at 21:15

            There are multiple issues with your code:

            • You don't check that the inputs are exactly as expected (real, double, non-sparse, etc.)
            • You are attaching memory allocated without MATLAB API functions to an mxArray
            • You are freeing the memory behind the pointers right after you attach them to the mxArray
            • You don't create the plhs[ ] mxArray variables before using them

            Normally, when working with mex routines one would do the following in order:

            • Check that inputs are exactly as expected
            • Create the output plhs[ ] mxArray variables
            • Get the pointers to the data areas of the plhs[ ] mxArray variables
            • Pass these pointers to the calculation routines

            In your case, maybe there is a reason you want to use the gsl_matrix_alloc( ) routine for your memory allocation instead of the MATLAB API memory allocation functions. Fine, but if you do this then you will have to copy the result into the plhs[ ] mxArray data area. You can't attach the pointer directly because that will screw up the MATLAB Memory Manager and lead to a crash downstream. But in all cases you need to create the plhs[ ] mxArray variables first. E.g., if we just go with your current memory allocation scheme you would need to copy the data:

            EDIT for gsl data copy

            Source https://stackoverflow.com/questions/66676500

            QUESTION

            Trying to mimic the fsolve function from Python in a cpp scritp for simple functions
            Asked 2021-Mar-17 at 18:30

            First of all, I'm new to C++. Tbh I find it very hard to "get used to" but the last week I have been trying to "translate" a script from Python to C++ due to computational time requirements.

            One of the problem I have is root-finding of simple 1D functions:

            First the simple MWE from Python: Trying to solve ax^2+bx+c = 0 :

            ...

            ANSWER

            Answered 2021-Mar-17 at 18:30

            What you need is to look into this similar issue with good explanation how to make it work error in GSL - root finding. To help, you can use https://www.desmos.com/calculator/zuaqvcvpbz to view the function, and you can set initial values like this: double x_lo = 0.0, x_hi = 1.0; in your implementation to make it run; Adding this code will help to find appropriate values for x_lo and x_hi :

            Source https://stackoverflow.com/questions/66658227

            QUESTION

            How to pass an Auto variable as input to another function
            Asked 2021-Mar-17 at 16:24

            I really want to pass a variable that is auto (function) as input in another function.

            Here is a structure that receives parameters for my xroot f:

            ...

            ANSWER

            Answered 2021-Mar-17 at 16:24

            auto is just a placeholder for a compiler-deduced type, depending on the context in which auto is used.

            In your example, you can't use auto as the return value of my_f_params::inter_auto(), because the compiler has no way to know what type inter_auto() actually returns, so it can't deduce the type of the auto. You would need to do this instead:

            Source https://stackoverflow.com/questions/66675912

            QUESTION

            GSL gsl_linalg_SV_decomp returning U and V reversed
            Asked 2021-Mar-09 at 07:50

            I have the following C code:

            ...

            ANSWER

            Answered 2021-Mar-09 at 07:50

            You didn't post your full code as a MWE, so I made a new implementation below. Unfortunately, currently the SVD in GSL requires M >= N, so I compute the SVD of the transpose of the matrix, and then output the correct U and V factors from that.

            Source https://stackoverflow.com/questions/66536134

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

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