isolator | Rapid and robust analysis of RNA-Seq experiments | Analytics library

 by   dcjones C Version: Current License: MIT

kandi X-RAY | isolator Summary

kandi X-RAY | isolator Summary

isolator is a C library typically used in Analytics applications. isolator has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. You can download it from GitHub.

Isolator analyzes RNA-Seq experiments. There are many methods to analyze RNA-Seq data. Isolator differs in few important ways. Note: I've run this tool on a lot of data, evaluated it with multiple benchmarks, and am writing a paper about it, but it's still alpha software. Contact me if you'd like help using it to analyze your data.
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            kandi-support Support

              isolator has a low active ecosystem.
              It has 34 star(s) with 7 fork(s). There are 4 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              There are 8 open issues and 1 have been closed. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of isolator is current.

            kandi-Quality Quality

              isolator has 0 bugs and 0 code smells.

            kandi-Security Security

              isolator has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              isolator code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              isolator is licensed under the MIT License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              isolator releases are not available. You will need to build from source code and install.
              Installation instructions are not available. Examples and code snippets are available.
              It has 131 lines of code, 9 functions and 2 files.
              It has low code complexity. Code complexity directly impacts maintainability of the code.

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            isolator Key Features

            No Key Features are available at this moment for isolator.

            isolator Examples and Code Snippets

            No Code Snippets are available at this moment for isolator.

            Community Discussions

            QUESTION

            Invalid JDBC-Url: Driver org.postgresql.Driver claims to not accept jdbcUrl, jdbc:postgresql://${DB_ADDR_ALIAS}:${DB_PORT}/${DB_NAME}
            Asked 2022-Mar-15 at 15:49

            Starting situation: I am building a REST-Service with Spring Boot and Maven. This REST-Service is writing to a Postgres database. Both components are dockerized and configured through the following docker-compose.yml (I use a .env file to isolate the confidential and repeated information. ${DB_Name} evaluates to "Taskitory".):

            ...

            ANSWER

            Answered 2022-Mar-03 at 19:51

            You should be passing the .env variables to backend container as you did for db:

            Source https://stackoverflow.com/questions/71341318

            QUESTION

            Selecting a material from a list, storing it and then returning the material as a new mater
            Asked 2021-Jul-30 at 14:45

            I am fairly new to C# and trying to produce a script in Unity that takes a list of meshes and materials then, via input searches through the items in the list and picks out the one with the same input. Taking the outputted new mesh and storing it in a new material/mesh. The idea behind this is to take the isolated Meshes and Materials to create a dictionary that means certain meshes will only use certain materials based on their naming conventions.

            I have managed to do so with the meshes, they return the object as a new mesh.

            However, the materials on the other hand, even though they're following the same logic are outputting the error "error CS1729: 'Material' does not contain a constructor that takes 0 arguments"

            Can anyone suggest a solution as I have be rattling my head and searching for days trying to find a solution.

            I have looked all over and I cannot seem to find a solution to my problem, I have a feeling that it'll be rather simple. I have looked over many documents and read through the unity documentation but nothing is making sense to me.

            Edit: I am using Universal Render Pipeline/Toon shaders

            ...

            ANSWER

            Answered 2021-Jul-30 at 13:50

            The problem is with the following line:

            Source https://stackoverflow.com/questions/68591744

            QUESTION

            apply multiple formula to create a column in dataframe
            Asked 2021-Mar-29 at 05:53

            i tried to create new column in a dataframe using different equations and inputs from other column in the dataframe. the equation i want to apply will also slightly differs conditioned on another column. here is the dummy dataframe

            ...

            ANSWER

            Answered 2021-Mar-29 at 05:53

            Apply group of functions are normally used for iterative calculations or for manipulating lists, whereas,

            Will this do?

            Source https://stackoverflow.com/questions/66848844

            QUESTION

            How can you mock the methods from a class if you have no control over the class?
            Asked 2021-Jan-21 at 18:24

            I'm using Xunit and Moq for unit testing. So far I was able to succesfully mock and test methods from interfaces. But how am I supposed to mock and test the methods of a class that I have no control over. The class has no interface and the methods are not virtual.

            I looked into Type Mock Isolator, but I could not make that work, and also that is not a feasible solution because it's paid and only has a 14 day trial, and I need to do this long term.

            What are my options?

            ...

            ANSWER

            Answered 2021-Jan-21 at 18:24

            Create a wrapper for the dependency. You don't need to test the implementation of code you didn't write. Mock the dependency wrapper with the anticipated or hypothetical outputs.

            Source https://stackoverflow.com/questions/65832779

            QUESTION

            reCAPTCHA Unexpected token in JSON at position 0
            Asked 2020-Nov-14 at 16:29

            We use reCAPTCHA ver 2 as checkbox "I am not bot". Since from 2020-11-05 19:23:00Z during our page loading we get exception:

            ...

            ANSWER

            Answered 2020-Nov-09 at 12:40

            We also faced the same issue on 11/5. For quick fix, we have embedded recapcha in iframe. It was getting block by ajax4jsf/framework.pack.js

            Source https://stackoverflow.com/questions/64737646

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install isolator

            You can download it from GitHub.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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            CLONE
          • HTTPS

            https://github.com/dcjones/isolator.git

          • CLI

            gh repo clone dcjones/isolator

          • sshUrl

            git@github.com:dcjones/isolator.git

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