SigProfilerExtractor allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the number of operative mutational signatures, their activities in each sample, and the probability for each signature to cause a specific mutation type in a cancer sample. The tool makes use of SigProfilerMatrixGenerator and SigProfilerPlotting.
Python Updated: 6 mo ago License: Permissive
A command-line utility program for automating the trivial, frequently occurring data preparation tasks: missing value interpolation, outlier removal, and encoding categorical variables.
Python Updated: 7 mo ago License: Permissive
Emergency room simulator which is highly configurable and can simulate a broad range of scenarios. It can be used by medical professionals/researchers to determine bottlenecks and areas in the emergency room which would benefit most from added resources.