cello | Genetic circuit design automation | Machine Learning library

by CIDARLAB Java Version: Current License: BSD-2-Clause

X-Ray Key Features Code Snippets Community Discussions(10)Vulnerabilities Install Support

kandi X-RAY | cello Summary

cello is a Java library typically used in Artificial Intelligence, Machine Learning applications. cello has no bugs, it has no vulnerabilities, it has build file available, it has a Permissive License and it has medium support. You can download it from GitHub.

The Cello input is a high-level logic specification written in Verilog, a hardware description language. The code is parsed to generate a truth table, and logic synthesis produces a circuit diagram with the genetically available gate types to implement the truth table. The gates in the circuit are assigned using experimentally characterized genetic gates. In assignment, a predicted circuit score guides a breadth-first search, or a Monte Carlo simulated annealing search. The assignment with the highest score is chosen, and this assignment can be physically implemented in a combinatorial number of different genetic layouts. The Eugene language is used for rule-based constrained combinatorial design of one or more final DNA sequence(s) for the designed circuit.

Support

Quality

Security

License

Reuse

Support

cello has a medium active ecosystem.

It has 762 star(s) with 132 fork(s). There are 79 watchers for this library.

It had no major release in the last 6 months.

There are 27 open issues and 9 have been closed. On average issues are closed in 59 days. There are 9 open pull requests and 0 closed requests.

It has a neutral sentiment in the developer community.

The latest version of cello is current.

Quality

cello has no bugs reported.

Security

cello has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

cello is licensed under the BSD-2-Clause License. This license is Permissive.

Permissive licenses have the least restrictions, and you can use them in most projects.

Reuse

cello releases are not available. You will need to build from source code and install.

Build file is available. You can build the component from source.

Installation instructions, examples and code snippets are available.

Top functions reviewed by kandi - BETA

kandi has reviewed cello and discovered the below as its top functions. This is intended to give you an instant insight into cello implemented functionality, and help decide if they suit your requirements.

Enumerates logic circuits using the experimental algorithm
Returns the summed RPUs of the gate
Recursively simulate the RPU
Get the output reu for the input parameters
Main entry point for testing
Retrieve a JSON Object from the specified file
Returns true if the provided jsonObject is a valid key
Enumerates the logic circuits
Returns the next gate for a given A_gateCircuit
Remove txn unit names
Returns a list of unique circuits that can be assigned to the rbs
Writes the abstract circuit for an abstract circle
Entry point for testing
Reconnect to the circuit
Categorize the input gates
Performs the authentication
Calculates a numerical addition matrix for a given point
Test program
Rewrite logic circuit
This method builds the internal circuits
Enumerates logic circuits
Submit a DNAS Compiler
Downloads a file and returns it as a string
Main entry point
Main entry point for testing
Generate logic circuits

Get all kandi verified functions for this library.

cello Key Features

No Key Features are available at this moment for cello.

cello Examples and Code Snippets

No Code Snippets are available at this moment for cello.

Community Discussions

Trending Discussions on cello

How do I display each element or alphabet as dash after it matches the input for Hangman?

Model Image for gallery function can't be used on many image

Groupby aggregate and transpose in pandas

How to avoid ffmpeg filter_complex overriding the fps of a file?

Only print first and second word of each line to output with sed

Why Won't The Card Expand?

Info with checkbox 'checked' property to be saved in local storage

Conditional aggregation on dataframe columns with combining 'n' rows into 1 row

my code doesn't work anymore but i haven't changed it

QUESTION

How do I display each element or alphabet as dash after it matches the input for Hangman?

Asked 2021-May-09 at 14:30

I have been on and off programming but recently I have been more active and done some basic projects. However I have been stuck on this particular problem for the past 3 weeks and still cannot seems to solve it. Looked through some codes and tried and only could improve some parts. The bottom is my full code.

The problems that I faced is the one that I have stated in my title, I need to display the mystery word as dashes and when I guess the unknown word, it was suppose to appear as the only word. One issue is when I guess the word correctly, it only display the single alphabet and reset immediately.

...

ANSWER

Answered 2021-May-09 at 14:30

Keep a list of all the player's guesses. When you start a new game, set all_guesses to [] and then, reading the letter from the console set:

Source https://stackoverflow.com/questions/67458676

QUESTION

Model Image for gallery function can't be used on many image

Asked 2021-May-02 at 11:34

Hello guys so im trying to make model image function for my gallery but I can't use the function on many image, any suggestion on how fix it ? can I change the var img to collect the element by class name? Thanks before.

Here's the code:

...

ANSWER

Answered 2021-May-02 at 09:16

Working with multiple images means working with a collection. For collection work, method forEach works well:

Source https://stackoverflow.com/questions/67354370

QUESTION

Groupby aggregate and transpose in pandas

Asked 2021-Apr-15 at 23:55

df=

...

ANSWER

Answered 2021-Apr-15 at 23:55

Can be done in one line but it's a bit of a mouthful...

Source https://stackoverflow.com/questions/67117077

QUESTION

How to avoid ffmpeg filter_complex overriding the fps of a file?

Asked 2021-Apr-07 at 15:48

I'm fairly new to ffmpeg so apologies if this is a simple problem.

I'm trying to tile four 60fps videos using the script below. It works, but the output is at 25fps. When I try to use -r to force it back to 60, it looks like 25fps upsampled to 60, counting duplicated frames when rendering.

How can I preserve the original files?

ffmpeg -i vln1.mp4 -i vln2.mp4 -i vla.mp4 -i cello.mp4 -filter_complex "nullsrc=size=2800x2400 [base]; [0:v] setpts=PTS-STARTPTS, scale=2800x600 [A]; [1:v] setpts=PTS-STARTPTS, scale=2800x600 [B]; [2:v] setpts=PTS-STARTPTS, scale=2800x600 [C]; [3:v] setpts=PTS-STARTPTS, scale=2800x600 [D]; [base] [A] overlay=shortest=0 [tmp1]; [tmp1][B] overlay=shortest=0:y=600 [tmp2]; [tmp2][C] overlay=shortest=0:y=1200 [tmp3]; [tmp3][D] overlay=shortest=0:y=1800" -c:v libx264 quartetscore.mp4

...

ANSWER

Answered 2021-Apr-07 at 15:48

Set the frame rate for the nullsrc filter (default is 25 fps):

ffmpeg -i vln1.mp4 -i vln2.mp4 -i vla.mp4 -i cello.mp4 -filter_complex "nullsrc=size=2800x2400:rate=60 [base]; [0:v] setpts=PTS-STARTPTS, scale=2800x600 [A]; [1:v] setpts=PTS-STARTPTS, scale=2800x600 [B]; [2:v] setpts=PTS-STARTPTS, scale=2800x600 [C]; [3:v] setpts=PTS-STARTPTS, scale=2800x600 [D]; [base] [A] overlay=shortest=0 [tmp1]; [tmp1][B] overlay=shortest=0:y=600 [tmp2]; [tmp2][C] overlay=shortest=0:y=1200 [tmp3]; [tmp3][D] overlay=shortest=0:y=1800" -c:v libx264 quartetscore.mp4

Or if you want to stack just use the hstack filter instead of nullsrc and multiple overlay:

ffmpeg -i vln1.mp4 -i vln2.mp4 -i vla.mp4 -i cello.mp4 -filter_complex "[0:v] setpts=PTS-STARTPTS, scale=2800x600 [A]; [1:v] setpts=PTS-STARTPTS, scale=2800x600 [B]; [2:v] setpts=PTS-STARTPTS, scale=2800x600 [C]; [3:v] setpts=PTS-STARTPTS, scale=2800x600 [D];[A][B][C][D]hstack=inputs=4" -c:v libx264 quartetscore.mp4

See Vertically or horizontally stack (mosaic) several videos using ffmpeg? for many more examples.

Source https://stackoverflow.com/questions/66988135

QUESTION

Only print first and second word of each line to output with sed

Asked 2021-Mar-15 at 07:27

I want to clean up a pattern file for later use, so only the first and second word (or number) are relevant.

I have this:

pattern.txt

...

ANSWER

Answered 2021-Mar-14 at 17:17

Completely based on your shown samples only, this could be easily done with awk. Written and tested with GNU awk, should work with any awk.

Source https://stackoverflow.com/questions/66626805

QUESTION

Why Won't The Card Expand?

Asked 2021-Jan-10 at 23:16

I was looking to include a responsive card template into my project and used one of the templates from CodePen to do this. However, when I copied the code from CodePen to my own platform, The card would not expand when I click on "click on expand" like it is unresponsive. But over here, the code runs fine, but not on the IDE I am using.

Where I got the whole code from initially: https://codepen.io/ryanparag/pen/EOBdOK

The HTML/CSS of the card:

...

ANSWER

Answered 2021-Jan-09 at 23:37

You're referencing javascript with the wrong tag.

Javascript should be referenced with a

It worked here and in codepen site, because both are not using a reference to the javascript, they are "creating one".

EDIT: To avoid the following error in the repl.it site:

Source https://stackoverflow.com/questions/65648288

QUESTION

Delete similar values in dictionary of 2dlists

Asked 2020-Nov-28 at 03:10

I have the following dictionary with 2dlist as values:

...

ANSWER

Answered 2020-Nov-28 at 03:10

I think you are on the right track, one easy to implement solution could be to just create a merge_years function and use that within a dict_comprehension:

Source https://stackoverflow.com/questions/65045893

QUESTION

Info with checkbox 'checked' property to be saved in local storage

Asked 2020-Oct-05 at 17:55

I would like to save the 'checked' property of a certain checkbox to the local storage, when I refresh the page, the property is lost and the check box is unchecked. What could I change to make this work? I am stuck on this problem for a bit of time. The first part is the JS, and the second part is only the part where i define the checkbox in the HTML. Here is my code:

...

ANSWER

Answered 2020-Oct-05 at 15:19

Local storage works by using the getItem() and setItem() methods on the localStorage object. With these methods you can get the currently stored value and set a new value.

Down here I've written two abstractions which make it a bit easier to return the checked value that is stored. It makes sure that the returned value is either true or false.

Source https://stackoverflow.com/questions/64210784

QUESTION

Conditional aggregation on dataframe columns with combining 'n' rows into 1 row

Asked 2020-Oct-02 at 18:34

I have an Input Dataframe that the following :

...

ANSWER

Answered 2020-Oct-02 at 18:34

You can groupby the grp to get the relative blocks inside the group:

Source https://stackoverflow.com/questions/64176455

QUESTION

my code doesn't work anymore but i haven't changed it

Asked 2020-Oct-01 at 07:35

i created several months ago a script to publish assignments for my students in google classroom.the code is the following

...

ANSWER

Answered 2020-Oct-01 at 07:35

Answer:

The issue seems to be that at some point, the type of the value obtained from autorini.getCell(k, 1).getValue() is not a string which is causing the error.

Steps to Solve:

In pubblicavideo(), the function pubblica() is called inside a loop with the variable contarighe passed. The value of this gets put into k for each run of pubblica.

These are the lines that are problematic:

Source https://stackoverflow.com/questions/64142724

Community Discussions, Code Snippets contain sources that include Stack Exchange Network