XNet | Bayesian algorithm to cluster XICs | Machine Learning library
kandi X-RAY | XNet Summary
kandi X-RAY | XNet Summary
A Bayesian algorithm to cluster XICs into isotopic envelopes.
Support
Quality
Security
License
Reuse
Top functions reviewed by kandi - BETA
- Initialize the bundle
- Reads the probabilities from a file
- Returns the count of a variable with the specified outcome
- absorbs the counts of this probability bundle
- Cluster the isotope traces
- Get the neighbors of a given trace
- Performs a clustering algorithm
- Declarates the consistent set for a connected set of isotopes
- Trains the probability bundle based on the parameters
- Increments the value of the bin at the given outcome
- Returns the index of the nearest value within the given list
- Gets the bin number of the given outcome
- This method initializes BayesNet based on the probability bundle
- Converts float array to string array
- Returns the probability of a random variable
- Converts an array of doubles to Strings
- Converts double range to string array
- Computes the arc for a trace
- Gets the probability distribution
- Writes the contents of a probability bundle to a file
- Checks whether a given trace is complete
- Loads the provided ranges into the grid
- Instantiates the grid
- synthesizes and returns a list of isotope traces
XNet Key Features
XNet Examples and Code Snippets
Community Discussions
Trending Discussions on XNet
QUESTION
I've been looking all around to find someone with a similar issue, but did not find anything. I'm coding a C# application using WPF UI.
To update the progressbar, I cannot use multithreading like I used to (in CLI) because it's telling me that I cannot update UI elements if it does not come from the main thread.
One solution is to create background workers. I've implemented this solution and it works well, but I want the tasks to be divided between more workers/threads (multithreading) in order to be more efficient.
I do not know the direction I have to take. If anyone can orient me with this issue, it would be more welcome.
Here is my code : (used to code with a MVVM pattern, just here to paste my code it's simpler for you)
...ANSWER
Answered 2021-Apr-22 at 14:54You can use Dispatcher.Invoke():
QUESTION
Fairly new to programming and python in general. Learning as I go. Breaking thing, ALOT, but learning ALOT.
What I want to do, which I have not been able to figure out is create a CSV with certain columns. Currently, one of the columns, after I organize the data, is a date-timestamp, which I need to be separated into 2 columns one for date(yyyy/mm/dd) and one for time (HH:MM:SS 24-hour time). The code looks like this:
...ANSWER
Answered 2021-Mar-10 at 02:16You can use str.split() on the timestamps with the expand param (2a below), or use .dt.date and .dt.time (2b below).
- Load the sample data:
QUESTION
I'm trying to receive stock data for about 1000 stocks, to speed up the process I'm using multiprocessing, unfortunately due to the large amount of stock data I'm trying to receive python as a whole just crashes.
Is there a way to use multiprocessing without python crashing, I understand it would still take some time to do all of the 1000 stocks, but all I need is to do this process as fast as possible.
...ANSWER
Answered 2021-Jan-31 at 19:18Ok, here is one way to obtain what you want in about 2min. Some tickers are bad, that's why it crashes.
Here's the code. I use joblib for threading or multiprocess since it doesn't work in my env. But, that's the spirit.
QUESTION
I have implemented JSSE in android and attempted to use it to send an email. The code in my AsyncTask extending class executes with no exception. However, the sendMail() method in the GmailSender class throws the following exceptions
...ANSWER
Answered 2020-Oct-16 at 11:58onComplete() will only be called long after doInBackground has finished. And hence your asynctask has finished.
So all code you execute in onComplete is not executed in doInBackground but on the main thread.
QUESTION
I am making an app in which an email will be sent to user's gmail id when a button is clicked. This is the following code of needed classes.
ForgotPasswordAcivity.java
...ANSWER
Answered 2020-Sep-22 at 09:15build.gradle:Project
QUESTION
I have code that basically opens a webpage + .ts file from a link and repeats it, but the problem is it increases memory usage each time and never removes the old data. After 2 Hours it uses more than 2GB. Any ideas on how I can fix this issue?
I'm using "Leaf.Xnet" Library for requests and this is how I create my threads:
...ANSWER
Answered 2020-Aug-13 at 08:43I am not entirely sure if this will fix your problem but for each thread that you start, you pretty much call an infinite number of executions of Check(). Since Check contains a while loop, the thread will run whatever is in side forever anyway, and now you're calling the method again on top of it. This means that everything that was created in the scope of the Check method will not be garbage collected and will increase your memory.
Replace all calls to
Check()withcontinuewhich will stop the execution in the while loop and start over.
Also, consider not using Threads, but instead use Tasks.
Also you do not dispose your HttpRequest.
QUESTION
I can connect to my Firebird database using Firebird ISQL Tool (Firebird 3.0.4) with the following command:
connect "C:\Documents\database.db" user 'USER' password 'PASSWORD';
When I want to do it in a Python script (Python v3.7.7 on a Windows10 64 bits), in a virtual environment including fdb v2.0.1 or even firebirdsql v1.1.3, I can't and I systematically get an error.
...ANSWER
Answered 2020-Jun-07 at 12:08The error indicates that the fbclient.dll loaded by FDB does not provide Firebird Embedded, and that you don't have Firebird Server running on your machine.
To address this you must either:
- Start Firebird Server (by starting its service or running
firebird -a) - If you want to use Firebird Embedded instead of Firebird Server, point FDB to a
fbclient.dllthat provides Firebird Embedded
Point 2 can be done in several ways. In my answer I'm assuming use of Firebird 3 installed in C:\Program Files\Firebird\Firebird-3.0.5.33220-0_x64. Since Firebird 3, a normal Firebird Server install also provides Firebird Embedded. To point to a Firebird Embedded, you can do the following:
- Add the Firebird installation directory to the
PATHenvironment variable (make sure it is listed before%SystemRoot\System32/C:\Windows\System32). On a normal Firebird installation, thefbclient.dllwithout Firebird Embedded is installed in theSystem32folder, and if that gets loaded, you can't use Firebird Embedded. - Use
fdb.load_apito load the client library:
QUESTION
I'm trying to generate my code WS definitions using Swagger Codegen » 2.2.1.
All configs are working and the classes are generate correctly by my .yaml definitions.
But I have a problem, the property basePath is being ignored.
My @RestController generate using only paths definition:
ANSWER
Answered 2020-Mar-07 at 16:33Searching more about this, I found the issue.
It's a bug fixed by HugoMario (commit referenced on 2 Dec 2019)
[Spring] Fixes #5244 Include basePath @RequestMapping in Spring API template
Release on master (#8131) » v2.4.12 / v2.4.11
And following Helen suggestion, I update my Swagger Codegen:
Summary: » It's a bug of an outdated version » Now works fine!
Maven dependecy for swagger-codegen-maven-plugin:
QUESTION
I'm working on an Android application that needs to crypt (and then to decrypt) file on the file system. I wrote an android test to test the code that I found on the web and I adapted for my needed. I try with to crypt a simple text and then try to decrypt it. The problem is when I try to decrypt it, some strange character appears at the beginning of the content that I want to crypt/decrypt. For example, I try to crypt/decrypt a string like this:
...ANSWER
Answered 2020-Jan-07 at 21:35Finally, I solve by myself. I post the solution just to help anybody that in the future will look for a similar situation. I mistake to retrieve the iv array in the encrypt method, I was generating another iv vector instead of using the one contained in secretKeys.
QUESTION
I recently updated my code base to Androidx and now trying to build production variant using the command
...ANSWER
Answered 2019-Aug-01 at 09:07Which version of Android studio are you using? 3.4?
What happens when you compile with R8 instead of Proguard? Sometimes error messages are more explicit.
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
No vulnerabilities reported
Install XNet
You can use XNet like any standard Java library. Please include the the jar files in your classpath. You can also use any IDE and you can run and debug the XNet component as you would do with any other Java program. Best practice is to use a build tool that supports dependency management such as Maven or Gradle. For Maven installation, please refer maven.apache.org. For Gradle installation, please refer gradle.org .
Support
Reuse Trending Solutions
Find, review, and download reusable Libraries, Code Snippets, Cloud APIs from over 650 million Knowledge Items
Find more librariesStay Updated
Subscribe to our newsletter for trending solutions and developer bootcamps
Share this Page
